RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 KCNN1Q92952 543 aa12.78□□□□□ -0.36
CNOT4-208ENST00000465721 SMG9Q9H0W8 520 aaKnown RBP12.78□□□□□ -0.36
CNOT4-208ENST00000465721 SMOC1Q9H4F8 434 aa12.78□□□□□ -0.36
CNOT4-208ENST00000465721 TASP1Q9H6P5 420 aa12.78□□□□□ -0.36
CNOT4-208ENST00000465721 NOL7Q9UMY1 257 aaKnown RBP12.78□□□□□ -0.36
CNOT4-208ENST00000465721 PCDHB6Q9Y5E3 794 aa12.78□□□□□ -0.36
CNOT4-208ENST00000465721 FREM2Q5SZK8 3169 aa12.78□□□□□ -0.36
CNOT4-208ENST00000465721 ITPR1Q14643 2758 aa12.78□□□□□ -0.36
CNOT4-208ENST00000465721 OTOL1A6NHN0 477 aaPredicted RBP12.77□□□□□ -0.37
CNOT4-208ENST00000465721 LACTBL1A8MY62 500 aa12.77□□□□□ -0.37
CNOT4-208ENST00000465721 AKAP3O75969 853 aa12.77□□□□□ -0.37
CNOT4-208ENST00000465721 ODC1P11926 461 aa12.77□□□□□ -0.37
CNOT4-208ENST00000465721 U2AF2P26368 475 aaKnown RBP eCLIP12.77□□□□□ -0.37
CNOT4-208ENST00000465721 CDC25CP30307 473 aa12.77□□□□□ -0.37
CNOT4-208ENST00000465721 NCKAP1LP55160 1127 aa12.77□□□□□ -0.37
CNOT4-208ENST00000465721 LILRA4P59901 499 aa12.77□□□□□ -0.37
CNOT4-208ENST00000465721 HYIQ5T013 277 aa12.77□□□□□ -0.37
CNOT4-208ENST00000465721 RIN3Q8TB24 985 aa12.77□□□□□ -0.37
CNOT4-208ENST00000465721 ZC3H10Q96K80 434 aaKnown RBP12.77□□□□□ -0.37
CNOT4-208ENST00000465721 SENP8Q96LD8 212 aa12.77□□□□□ -0.37
CNOT4-208ENST00000465721 SEPT5Q99719 369 aaPredicted RBP12.77□□□□□ -0.37
CNOT4-208ENST00000465721 FAM83CQ9BQN1 747 aa12.77□□□□□ -0.37
CNOT4-208ENST00000465721 LLPHQ9BRT6 129 aaKnown RBP12.77□□□□□ -0.37
CNOT4-208ENST00000465721 RALYQ9UKM9 306 aaKnown RBP12.77□□□□□ -0.37
CNOT4-208ENST00000465721 PCDHGA5Q9Y5G8 931 aa12.77□□□□□ -0.37
CNOT4-208ENST00000465721 LAD1O00515 517 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 TRDMT1O14717 391 aaKnown RBP12.76□□□□□ -0.37
CNOT4-208ENST00000465721 XPOTO43592 962 aaKnown RBP12.76□□□□□ -0.37
CNOT4-208ENST00000465721 KCNK5O95279 499 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 PIGRP01833 764 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 CYP11A1P05108 521 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 CCDC192P0DO97 292 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 MPLP40238 635 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 PRPHP41219 470 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 MATR3P43243 847 aaKnown RBP eCLIP12.76□□□□□ -0.371e-6■■■■□ 20.8
CNOT4-208ENST00000465721 SMTNP53814 917 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 SLC12A3P55017 1021 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 GNL2Q13823 731 aaKnown RBP12.76□□□□□ -0.37
CNOT4-208ENST00000465721 KYAT1Q16773 422 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 PLK5Q496M5 336 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 SPATA1Q5VX52 437 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 TCEAL6Q6IPX3 200 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 ARMCX5Q6P1M9 558 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 TMEM150AQ86TG1 271 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 TCEAL3Q969E4 200 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 PNMA5Q96PV4 448 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 GCNAQ96QF7 691 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 LSM14BQ9BX40 385 aaKnown RBP12.76□□□□□ -0.37
CNOT4-208ENST00000465721 SLC46A2Q9BY10 475 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 ZCWPW1Q9H0M4 648 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 GKN1Q9NS71 199 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 POLR3BQ9NW08 1133 aaPredicted RBP12.76□□□□□ -0.37
CNOT4-208ENST00000465721 CCL26Q9Y258 94 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 ADAMTS9Q9P2N4 1935 aa12.76□□□□□ -0.37
CNOT4-208ENST00000465721 ANO9A1A5B4 782 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 HNRNPDLO14979 420 aaKnown RBP12.75□□□□□ -0.37
CNOT4-208ENST00000465721 OGTO15294 1046 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 RNF40O75150 1001 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 EGFP01133 1207 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 NFICP08651 508 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 NMT1P30419 496 aaKnown RBP12.75□□□□□ -0.37
CNOT4-208ENST00000465721 TUFMP49411 452 aaKnown RBP12.75□□□□□ -0.37
CNOT4-208ENST00000465721 CDR1P51861 262 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 GRSF1Q12849 480 aaKnown RBP eCLIP12.75□□□□□ -0.37
CNOT4-208ENST00000465721 RUNX3Q13761 415 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 VEPH1Q14D04 833 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 MGAT5BQ3V5L5 792 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 SLC39A12Q504Y0 691 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 C9orf57Q5W0N0 161 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 NAIF1Q69YI7 327 aaPredicted RBP12.75□□□□□ -0.37
CNOT4-208ENST00000465721 TRIM68Q6AZZ1 485 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 JADE1Q6IE81 842 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 CMTM8Q8IZV2 173 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 SYT2Q8N9I0 419 aaPredicted RBP12.75□□□□□ -0.37
CNOT4-208ENST00000465721 USP13Q92995 863 aaPredicted RBP12.75□□□□□ -0.37
CNOT4-208ENST00000465721 BICD1Q96G01 975 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 HHIPQ96QV1 700 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 TSPAN18Q96SJ8 248 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 DUSP15Q9H1R2 295 aaPredicted RBP12.75□□□□□ -0.37
CNOT4-208ENST00000465721 EBF3Q9H4W6 596 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.75□□□□□ -0.37
CNOT4-208ENST00000465721 VPS45Q9NRW7 570 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 THG1LQ9NWX6 298 aaKnown RBP12.75□□□□□ -0.37
CNOT4-208ENST00000465721 KCNG1Q9UIX4 513 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 SLC8A2Q9UPR5 921 aa12.75□□□□□ -0.37
CNOT4-208ENST00000465721 NPHP3-ACAD11A0A0J9YXS1 232 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 PIRO00625 290 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 ATG13O75143 517 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 PROS1P07225 676 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 ARSAP15289 507 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 HMGA1P17096 107 aaKnown RBP12.74□□□□□ -0.37
CNOT4-208ENST00000465721 PAX3P23760 479 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 LIG4P49917 911 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 HMGN5P82970 282 aaKnown RBP12.74□□□□□ -0.37
CNOT4-208ENST00000465721 PTPAQ15257 358 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 TMEM119Q4V9L6 283 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 ARSHQ5FYA8 562 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 PSAPL1Q6NUJ1 521 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 SLC39A4Q6P5W5 647 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 DTHD1Q6ZMT9 781 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms