RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 SLC12A3P55017 1021 aa15.82■□□□□ 0.12
MCF2L-220ENST00000464800 C9orf57Q5W0N0 161 aa15.82■□□□□ 0.12
MCF2L-220ENST00000464800 JADE1Q6IE81 842 aa15.82■□□□□ 0.12
MCF2L-220ENST00000464800 FSTL4Q6MZW2 842 aa15.82■□□□□ 0.12
MCF2L-220ENST00000464800 CD302Q8IX05 232 aa15.82■□□□□ 0.12
MCF2L-220ENST00000464800 CMTM8Q8IZV2 173 aa15.82■□□□□ 0.12
MCF2L-220ENST00000464800 C2orf15Q8WU43 125 aaKnown RBP15.82■□□□□ 0.12
MCF2L-220ENST00000464800 CDK5RAP3Q96JB5 506 aa15.82■□□□□ 0.12
MCF2L-220ENST00000464800 PLIN2Q99541 437 aa15.82■□□□□ 0.12
MCF2L-220ENST00000464800 SLC46A2Q9BY10 475 aa15.82■□□□□ 0.12
MCF2L-220ENST00000464800 ZCWPW1Q9H0M4 648 aa15.82■□□□□ 0.12
MCF2L-220ENST00000464800 GKN1Q9NS71 199 aa15.82■□□□□ 0.12
MCF2L-220ENST00000464800 DSEQ9UL01 958 aa15.82■□□□□ 0.12
MCF2L-220ENST00000464800 CHD6Q8TD26 2715 aa15.82■□□□□ 0.12
MCF2L-220ENST00000464800 NPHP3-ACAD11A0A0J9YXS1 232 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 TRDMT1O14717 391 aaKnown RBP15.81■□□□□ 0.12
MCF2L-220ENST00000464800 EIF5BO60841 1220 aaKnown RBP15.81■□□□□ 0.12
MCF2L-220ENST00000464800 SEC24BO95487 1268 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 ADRB2P07550 413 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 NFICP08651 508 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 PLA2G4BP0C869 781 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 SCP2P22307 547 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 CDR1P51861 262 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 BFSP1Q12934 665 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 RUNX3Q13761 415 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 TMEM132DQ14C87 1099 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 PLA2G2CQ5R387 149 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 METTL23Q86XA0 190 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 CAMKK1Q8N5S9 505 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 KCNN1Q92952 543 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 PNMA5Q96PV4 448 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 FAM83CQ9BQN1 747 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 MSTO1Q9BUK6 570 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 EBF3Q9H4W6 596 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 HPS4Q9NQG7 708 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.81■□□□□ 0.12
MCF2L-220ENST00000464800 ODF2LQ9ULJ1 636 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 TBX20Q9UMR3 447 aa15.81■□□□□ 0.12
MCF2L-220ENST00000464800 ZFHX4Q86UP3 3567 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 K7ENM7 598 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 RNF40O75150 1001 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 PIGRP01833 764 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 DDX6P26196 483 aaKnown RBP eCLIP15.8■□□□□ 0.12
MCF2L-220ENST00000464800 AMPD2Q01433 879 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 SMARCB1Q12824 385 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 TRIM68Q6AZZ1 485 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 CC2D1AQ6P1N0 951 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-220ENST00000464800 THEM5Q8N1Q8 247 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 MAB21L3Q8N8X9 362 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 SPPL2BQ8TCT7 592 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 GIPC2Q8TF65 315 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 ZC3H10Q96K80 434 aaKnown RBP15.8■□□□□ 0.12
MCF2L-220ENST00000464800 HHIPQ96QV1 700 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 SMOC1Q9H4F8 434 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 KIF9Q9HAQ2 790 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 VPS45Q9NRW7 570 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 ABI2Q9NYB9 513 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-220ENST00000464800 CPSF3Q9UKF6 684 aaKnown RBP15.8■□□□□ 0.12
MCF2L-220ENST00000464800 CCL26Q9Y258 94 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 DERAQ9Y315 318 aa15.8■□□□□ 0.12
MCF2L-220ENST00000464800 A0A0B4J269 797 aa15.79■□□□□ 0.12
MCF2L-220ENST00000464800 ANO9A1A5B4 782 aa15.79■□□□□ 0.12
MCF2L-220ENST00000464800 OTOL1A6NHN0 477 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-220ENST00000464800 PIRO00625 290 aa15.79■□□□□ 0.12
MCF2L-220ENST00000464800 KCNK5O95279 499 aa15.79■□□□□ 0.12
MCF2L-220ENST00000464800 EGFP01133 1207 aa15.79■□□□□ 0.12
MCF2L-220ENST00000464800 HAPLN1P10915 354 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-220ENST00000464800 NMT1P30419 496 aaKnown RBP15.79■□□□□ 0.12
MCF2L-220ENST00000464800 NLRP12P59046 1061 aa15.79■□□□□ 0.12
MCF2L-220ENST00000464800 ATP2C1P98194 919 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-220ENST00000464800 RNF43Q68DV7 783 aa15.79■□□□□ 0.12
MCF2L-220ENST00000464800 USP13Q92995 863 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-220ENST00000464800 EXOC4Q96A65 974 aa15.79■□□□□ 0.12
MCF2L-220ENST00000464800 CHFRQ96EP1 664 aa15.79■□□□□ 0.12
MCF2L-220ENST00000464800 ZSCAN31Q96LW9 406 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-220ENST00000464800 REEP2Q9BRK0 252 aa15.79■□□□□ 0.12
MCF2L-220ENST00000464800 PYM1Q9BRP8 204 aaKnown RBP15.79■□□□□ 0.12
MCF2L-220ENST00000464800 LSM14BQ9BX40 385 aaKnown RBP15.79■□□□□ 0.12
MCF2L-220ENST00000464800 SH2B1Q9NRF2 756 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-220ENST00000464800 TDP1Q9NUW8 608 aa15.79■□□□□ 0.12
MCF2L-220ENST00000464800 CFAP47Q6ZTR5 3102 aa15.79■□□□□ 0.12
MCF2L-220ENST00000464800 NUP205Q92621 2012 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 CEP295Q9C0D2 2601 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 VWA3AA6NCI4 1184 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 CYB561D2O14569 222 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 ARSAP15289 507 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 DRD1P21728 446 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 TAF6P49848 677 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 KARSQ15046 597 aaKnown RBP15.78■□□□□ 0.12
MCF2L-220ENST00000464800 ELF2Q15723 593 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 PLK5Q496M5 336 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 FBXO43Q4G163 708 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 TMEM119Q4V9L6 283 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 ARSHQ5FYA8 562 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 TCEAL6Q6IPX3 200 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 PSAPL1Q6NUJ1 521 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 TMEM150AQ86TG1 271 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 MYCT1Q8N699 235 aa15.78■□□□□ 0.12
MCF2L-220ENST00000464800 MRPS31Q92665 395 aaKnown RBP15.78■□□□□ 0.12
MCF2L-220ENST00000464800 TCEAL3Q969E4 200 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms