RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ITGB3P05106 788 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 HAPLN1P10915 354 aaPredicted RBP15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 ATF6P18850 670 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 GABRR2P28476 465 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 CDC25CP30307 473 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 POLR2BP30876 1174 aaKnown RBP15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 WNT7BP56706 349 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 NFE2Q16621 373 aaPredicted RBP15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 MGAT5BQ3V5L5 792 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 TMEM86AQ8N2M4 240 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 GPD1LQ8N335 351 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 IQUBQ8NA54 791 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 ZSWIM2Q8NEG5 633 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 CXorf38Q8TB03 319 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 FAM200AQ8TCP9 573 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 LEO1Q8WVC0 666 aaPredicted RBP15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 FAM3CQ92520 227 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 NELL1Q92832 810 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 RSPRY1Q96DX4 576 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 ACBD6Q9BR61 282 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 FGFBP2Q9BYJ0 223 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 TRIM9Q9C026 710 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 TASP1Q9H6P5 420 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 IL21Q9HBE4 155 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 PRMT8Q9NR22 394 aaPredicted RBP15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 GDAP2Q9NXN4 497 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 PCDHB5Q9Y5E4 795 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 PCDHGA2Q9Y5H1 932 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 PATJQ8NI35 1801 aa15.47■□□□□ 0.07
SNRNP40-203ENST00000463988 NCANO14594 1321 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 COL4A2P08572 1712 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 SOBPA7XYQ1 873 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 KINO60870 393 aaKnown RBP15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 CUTAO60888 179 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 HUS1O60921 280 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 PRPF6O94906 941 aaKnown RBP15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 RBP5P82980 135 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 TSPY1Q01534 308 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 CSTF1Q05048 431 aaKnown RBP15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 TAF12Q16514 161 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 STXBP5Q5T5C0 1151 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 GPR158Q5T848 1215 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 PDCL2Q8N4E4 241 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 CSGALNACT2Q8N6G5 542 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 ZBTB44Q8NCP5 570 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 CSGALNACT1Q8TDX6 532 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 GCNAQ96QF7 691 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 LPIN3Q9BQK8 851 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 FAM126AQ9BYI3 521 aaPredicted RBP15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 CHRDQ9H2X0 955 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 PCIF1Q9H4Z3 704 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 C8orf33Q9H7E9 229 aaPredicted RBP15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 ABCB6Q9NP58 842 aa15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 TFIP11Q9UBB9 837 aaKnown RBP15.46■□□□□ 0.07
SNRNP40-203ENST00000463988 CACNA1AO00555 2505 aa15.46■□□□□ 0.06
SNRNP40-203ENST00000463988 TCHHQ07283 1943 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 GOLGA8IPA6NC78 632 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 ZNF233A6NK53 670 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 GOLGA8JA6NMD2 632 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 DPYSL4O14531 572 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 EIF3DO15371 548 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 PLCB2Q00722 1185 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 MYL7Q01449 175 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 MTAPQ13126 283 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 SURF1Q15526 300 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 ARHGAP29Q52LW3 1261 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 TOP6BLQ8N6T0 577 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 SUMF1Q8NBK3 374 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 ATRIPQ8WXE1 791 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 MAGEF1Q9HAY2 307 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 KIAA1586Q9HCI6 787 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 PDE11AQ9HCR9 933 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 INTS13Q9NVM9 706 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 ZSCAN32Q9NX65 697 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 ABI2Q9NYB9 513 aaPredicted RBP15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 SIX4Q9UIU6 781 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 NDRG2Q9UN36 371 aaKnown RBP15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 L1RE1Q9UN81 338 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 CEP250Q9BV73 2442 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 TICRRQ7Z2Z1 1910 aa15.45■□□□□ 0.06
SNRNP40-203ENST00000463988 TMEM191BP0C7N4 346 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 DDX6P26196 483 aaKnown RBP eCLIP15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 LHX1P48742 406 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 BFSP1Q12934 665 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 MYO1EQ12965 1108 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 ATL3Q6DD88 541 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 SHC4Q6S5L8 630 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 EPM2AIP1Q7L775 607 aaPredicted RBP15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 DPH6Q7L8W6 267 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 LIMS2Q7Z4I7 341 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 ZNF507Q8TCN5 953 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 RUBCNQ92622 972 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 ANKRD36BP1Q96IX9 119 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 LRRC3BQ96PB8 259 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 PKMYT1Q99640 499 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 C7orf25Q9BPX7 421 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 MTMR12Q9C0I1 747 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 LMAN1LQ9HAT1 526 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 TMLHEQ9NVH6 421 aa15.44■□□□□ 0.06
SNRNP40-203ENST00000463988 DDX43Q9NXZ2 648 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms