RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 RBP5P82980 135 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 BFSP1Q12934 665 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 VEPH1Q14D04 833 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 GPR158Q5T848 1215 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 YAF2Q8IY57 180 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 ADSSL1Q8N142 457 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 C7orf25Q9BPX7 421 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 SEMA4AQ9H3S1 761 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 TMLHEQ9NVH6 421 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 ABI2Q9NYB9 513 aaPredicted RBP20.3■□□□□ 0.84
SF3A1-205ENST00000463818 ITGA11Q9UKX5 1188 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 L1RE1Q9UN81 338 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 COL4A3Q01955 1670 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 ZNF233A6NK53 670 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 POLR2DO15514 142 aaKnown RBP20.29■□□□□ 0.84
SF3A1-205ENST00000463818 KRT19P08727 400 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 TMEM191BP0C7N4 346 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 ATF6P18850 670 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 TSPY1Q01534 308 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 TAF12Q16514 161 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 ARHGAP15Q53QZ3 475 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 LMBRD2Q68DH5 695 aaPredicted RBP20.29■□□□□ 0.84
SF3A1-205ENST00000463818 CNNM4Q6P4Q7 775 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 LRRC52Q8N7C0 313 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 SPRYD3Q8NCJ5 442 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 ZNF507Q8TCN5 953 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 MKNK1Q9BUB5 465 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 MTMR12Q9C0I1 747 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 SIX4Q9UIU6 781 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 NDRG2Q9UN36 371 aaKnown RBP20.29■□□□□ 0.84
SF3A1-205ENST00000463818 PCDHA7Q9UN72 937 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 PCDHB5Q9Y5E4 795 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 SCN1AP35498 2009 aa20.29■□□□□ 0.84
SF3A1-205ENST00000463818 DPYSL4O14531 572 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 LMNAP02545 664 aaKnown RBP20.28■□□□□ 0.84
SF3A1-205ENST00000463818 RPS9P46781 194 aaKnown RBP20.28■□□□□ 0.84
SF3A1-205ENST00000463818 CSTF1Q05048 431 aaKnown RBP20.28■□□□□ 0.84
SF3A1-205ENST00000463818 EPM2AIP1Q7L775 607 aaPredicted RBP20.28■□□□□ 0.84
SF3A1-205ENST00000463818 CBWD2Q8IUF1 395 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 FAM3CQ92520 227 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 ANKRD36BP1Q96IX9 119 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 LRRC3BQ96PB8 259 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 ACBD6Q9BR61 282 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 PI4K2AQ9BTU6 479 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 TASP1Q9H6P5 420 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 IL21Q9HBE4 155 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 INTS13Q9NVM9 706 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 GDAP2Q9NXN4 497 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 DDX43Q9NXZ2 648 aaKnown RBP20.28■□□□□ 0.84
SF3A1-205ENST00000463818 HSPBP1Q9NZL4 362 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 FBXO4Q9UKT5 387 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 SNX9Q9Y5X1 595 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 PIAS3Q9Y6X2 628 aa20.28■□□□□ 0.84
SF3A1-205ENST00000463818 CHADO15335 359 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 EIF3DO15371 548 aaKnown RBP eCLIP20.27■□□□□ 0.84
SF3A1-205ENST00000463818 CASP1P29466 404 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 CDC25CP30307 473 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 ME1P48163 572 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 CYP4F8P98187 520 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 SURF1Q15526 300 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 NFE2Q16621 373 aaPredicted RBP20.27■□□□□ 0.84
SF3A1-205ENST00000463818 FAM26FQ5R3K3 315 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 ZC3H14Q6PJT7 736 aaKnown RBP20.27■□□□□ 0.84
SF3A1-205ENST00000463818 ZNF687Q8N1G0 1237 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 TMEM86AQ8N2M4 240 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 OR5B17Q8NGF7 314 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 BLZF1Q9H2G9 400 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 FAM13BQ9NYF5 915 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 R3HCC1Q9Y3T6 440 aaKnown RBP20.27■□□□□ 0.84
SF3A1-205ENST00000463818 MYO15AQ9UKN7 3530 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 CACNA1IQ9P0X4 2223 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 DMDP11532 3685 aa20.27■□□□□ 0.84
SF3A1-205ENST00000463818 ARNTLO00327 626 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 TGFB1I1O43294 461 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 PRPF40AO75400 957 aaKnown RBP20.26■□□□□ 0.83
SF3A1-205ENST00000463818 ACAT1P24752 427 aaKnown RBP20.26■□□□□ 0.83
SF3A1-205ENST00000463818 MYL7Q01449 175 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 FCHO2Q0JRZ9 810 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 PKP1Q13835 747 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 DUOXA2Q1HG44 320 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 ZNF528Q3MIS6 628 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 ATL3Q6DD88 541 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 UNC13DQ70J99 1090 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 OSTM1Q86WC4 334 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 TOP6BLQ8N6T0 577 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 RDH13Q8NBN7 331 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 CSGALNACT1Q8TDX6 532 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 SLC46A2Q9BY10 475 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 LMAN1LQ9HAT1 526 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 MAGEF1Q9HAY2 307 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 KIAA1586Q9HCI6 787 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 FAM186AA6NE01 2351 aa20.26■□□□□ 0.83
SF3A1-205ENST00000463818 F5P12259 2224 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.25■□□□□ 0.83
SF3A1-205ENST00000463818 CLIC2O15247 247 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 TNNC2P02585 160 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 HMGA1P17096 107 aaKnown RBP20.25■□□□□ 0.83
SF3A1-205ENST00000463818 CCNE1P24864 410 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 WEE1P30291 646 aa20.25■□□□□ 0.83
SF3A1-205ENST00000463818 LHX1P48742 406 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms