RNA–Protein interactions for RNA: ENST00000463634.6

PRPF4B-203, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 2,590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-203ENST00000463634 CCDC114Q96M63 670 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 RUNDC3BQ96NL0 473 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 OSBPL8Q9BZF1 889 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 PABPC3Q9H361 631 aaKnown RBP8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 SEMA4AQ9H3S1 761 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 SETD4Q9NVD3 440 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 ASIC3Q9UHC3 531 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 PCDHGC3Q9UN70 934 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 COL1A2P08123 1366 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 EIF3HO15372 352 aaKnown RBP eCLIP8.56□□□□□ -1.041e-6■■□□□ 14.5
PRPF4B-203ENST00000463634 CELF2O95319 508 aaKnown RBP8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 CDH5P33151 784 aaPredicted RBP8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 MAN1A1P33908 653 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 TNFAIP2Q03169 654 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 KRT71Q3SY84 523 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 KAZNQ674X7 775 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 DPH6Q7L8W6 267 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 PLEKHH3Q7Z736 793 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 PRUNE1Q86TP1 453 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 CCDC25Q86WR0 208 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 SLC4A11Q8NBS3 891 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 EXD1Q8NHP7 514 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 SLCO2A1Q92959 643 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 ELOVL4Q9GZR5 314 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 FAM49AQ9H0Q0 323 aaPredicted RBP8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 CEP83Q9Y592 693 aa8.56□□□□□ -1.04
PRPF4B-203ENST00000463634 UNCXA6NJT0 531 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 KRT1P04264 644 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 ATF7P17544 494 aaPredicted RBP8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 RFC1P35251 1148 aaPredicted RBP8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 YWHAEP62258 255 aaKnown RBP8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 NFX1Q12986 1120 aaKnown RBP8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 CALCOCO2Q13137 446 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 SLC29A2Q14542 456 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 TMEM132DQ14C87 1099 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 DGKDQ16760 1214 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 DENND2CQ68D51 928 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 C3orf20Q8ND61 904 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 JOSD2Q8TAC2 188 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 HPDLQ96IR7 371 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 CPXM1Q96SM3 734 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 PARK7Q99497 189 aaKnown RBP8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 ZNF518BQ9C0D4 1074 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 ABHD16BQ9H3Z7 469 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 MTRF1LQ9UGC7 380 aaKnown RBP8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 PARP2Q9UGN5 583 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 CPA4Q9UI42 421 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 NOVA2Q9UNW9 492 aaKnown RBP8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 AGAP1Q9UPQ3 857 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 A0A1B0GUA9 196 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 SMIM23A6NLE4 172 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 DYNC1LI2O43237 492 aaPredicted RBP8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 CAND2O75155 1236 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 CILPO75339 1184 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 GBP1P32455 592 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 FAM110CQ1W6H9 321 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 MFSD7Q6UXD7 560 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 RUFY4Q6ZNE9 571 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 MAIP1Q8WWC4 291 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 SLITRK1Q96PX8 696 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 ASB7Q9H672 318 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 CDHR5Q9HBB8 845 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 RNF19AQ9NV58 838 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 BRCA2P51587 3418 aa8.55□□□□□ -1.04
PRPF4B-203ENST00000463634 MED7O43513 233 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 ERBB2P04626 1255 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 IVLP07476 585 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 NUDT17P0C025 328 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 HOXD8P13378 290 aaPredicted RBP8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 IVDP26440 423 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 CHKAP35790 457 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 PSMC4P43686 418 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 PSMC1P62191 440 aaKnown RBP8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 PTPN11Q06124 597 aaPredicted RBP8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 PTK6Q13882 451 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 ODF2Q5BJF6 829 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 SPDYCQ5MJ68 293 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 EMC10Q5UCC4 262 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 CNPY4Q8N129 248 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 EMC1Q8N766 993 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 C2orf69Q8N8R5 385 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 ATL2Q8NHH9 583 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 BCAS4Q8TDM0 211 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 RAPGEF5Q92565 580 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 TMEM176AQ96HP8 235 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 PWWP2AQ96N64 755 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 ACAP3Q96P50 834 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 SYNCQ9H7C4 482 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 AAASQ9NRG9 546 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 DNAJC17Q9NVM6 304 aaKnown RBP8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 DPP3Q9NY33 737 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 HES2Q9Y543 173 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 CEP350Q5VT06 3117 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 TLDC2A0PJX2 215 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 M0QYV0 167 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 PIK3R2O00459 728 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 MICAL2O94851 1124 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 NPTXRO95502 500 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 GAS8O95995 478 aa8.54□□□□□ -1.04
PRPF4B-203ENST00000463634 PAEPP09466 180 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms