RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 CDC25CP30307 473 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 SOX9P48436 509 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 NRLP54845 237 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 FCHO2Q0JRZ9 810 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 LRRC32Q14392 662 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 SLC39A14Q15043 492 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 PTPAQ15257 358 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 SKOR2Q2VWA4 1001 aaPredicted RBP16.3■□□□□ 0.2
COL16A1-206ENST00000461217 WSCD1Q658N2 575 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 C1orf228Q6PIY5 440 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 EFCAB13Q8IY85 973 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 SYCP3Q8IZU3 236 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 ZNF687Q8N1G0 1237 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 LINC00301Q8NCQ3 95 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 TTC8Q8TAM2 541 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 SPPL2BQ8TCT7 592 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 GIPC2Q8TF65 315 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 NOC3LQ8WTT2 800 aaKnown RBP16.3■□□□□ 0.2
COL16A1-206ENST00000461217 ZFYVE19Q96K21 471 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 CLIC6Q96NY7 704 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 ACCSQ96QU6 501 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 FAM213AQ9BRX8 229 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 EPC1Q9H2F5 836 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 C8orf33Q9H7E9 229 aaPredicted RBP16.3■□□□□ 0.2
COL16A1-206ENST00000461217 GDPD2Q9HCC8 539 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 MORC2Q9Y6X9 1032 aaPredicted RBP16.3■□□□□ 0.2
COL16A1-206ENST00000461217 ANK1P16157 1881 aa16.3■□□□□ 0.2
COL16A1-206ENST00000461217 PTPRZ1P23471 2315 aaPredicted RBP16.29■□□□□ 0.2
COL16A1-206ENST00000461217 MYMKA6NI61 221 aa16.29■□□□□ 0.2
COL16A1-206ENST00000461217 ARNTLO00327 626 aa16.29■□□□□ 0.2
COL16A1-206ENST00000461217 TFAMQ00059 246 aaKnown RBP16.29■□□□□ 0.2
COL16A1-206ENST00000461217 POU5F1Q01860 360 aaKnown RBP16.29■□□□□ 0.2
COL16A1-206ENST00000461217 PUM1Q14671 1186 aaKnown RBP eCLIP16.29■□□□□ 0.2
COL16A1-206ENST00000461217 ARHGAP29Q52LW3 1261 aa16.29■□□□□ 0.2
COL16A1-206ENST00000461217 CRELD2Q6UXH1 353 aaPredicted RBP16.29■□□□□ 0.2
COL16A1-206ENST00000461217 NT5DC4Q86YG4 428 aa16.29■□□□□ 0.2
COL16A1-206ENST00000461217 DCP1BQ8IZD4 617 aaKnown RBP16.29■□□□□ 0.2
COL16A1-206ENST00000461217 C2orf15Q8WU43 125 aaKnown RBP16.29■□□□□ 0.2
COL16A1-206ENST00000461217 NELL1Q92832 810 aa16.29■□□□□ 0.2
COL16A1-206ENST00000461217 SAAL1Q96ER3 474 aa16.29■□□□□ 0.2
COL16A1-206ENST00000461217 MKNK1Q9BUB5 465 aa16.29■□□□□ 0.2
COL16A1-206ENST00000461217 TASP1Q9H6P5 420 aa16.29■□□□□ 0.2
COL16A1-206ENST00000461217 GMEB2Q9UKD1 530 aa16.29■□□□□ 0.2
COL16A1-206ENST00000461217 RAB23Q9ULC3 237 aa16.29■□□□□ 0.2
COL16A1-206ENST00000461217 SRPRBQ9Y5M8 271 aaKnown RBP16.29■□□□□ 0.2
COL16A1-206ENST00000461217 TCHHQ07283 1943 aa16.29■□□□□ 0.2
COL16A1-206ENST00000461217 SPECC1L-ADORA2AF8WAN1 911 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 PPP6R2O75170 966 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 PPP1R37O75864 691 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 PRAMEF12O95522 483 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 ITGB3P05106 788 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 CHRNB1P11230 501 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 ADSSP30520 456 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 PNPLA4P41247 253 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 STAT6P42226 847 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 CXCL12P48061 93 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 ME1P48163 572 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 MLLT6P55198 1093 aaPredicted RBP16.28■□□□□ 0.2
COL16A1-206ENST00000461217 UBE2HP62256 183 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 TSPY1Q01534 308 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 SATB1Q01826 763 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 KCNA1Q09470 495 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 SMARCB1Q12824 385 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 L1TD1Q5T7N2 865 aaKnown RBP16.28■□□□□ 0.2
COL16A1-206ENST00000461217 CCDC73Q6ZRK6 1079 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 GPR161Q8N6U8 529 aaKnown RBP16.28■□□□□ 0.2
COL16A1-206ENST00000461217 BPIFB1Q8TDL5 484 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 RBM12Q9NTZ6 932 aaKnown RBP16.28■□□□□ 0.2
COL16A1-206ENST00000461217 LMBRD1Q9NUN5 540 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 OBP2AQ9NY56 170 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 GTSE1Q9NYZ3 720 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 USP18Q9UMW8 372 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 PCDHB5Q9Y5E4 795 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 PCDHB13Q9Y5F0 798 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 CACNA1IQ9P0X4 2223 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 VPS13AQ96RL7 3174 aa16.28■□□□□ 0.2
COL16A1-206ENST00000461217 NUP210Q8TEM1 1887 aaPredicted RBP16.28■□□□□ 0.2
COL16A1-206ENST00000461217 RIF1Q5UIP0 2472 aaKnown RBP16.27■□□□□ 0.2
COL16A1-206ENST00000461217 MBD3O95983 291 aa16.27■□□□□ 0.2
COL16A1-206ENST00000461217 LDHAP00338 332 aaKnown RBP16.27■□□□□ 0.2
COL16A1-206ENST00000461217 HAPLN1P10915 354 aaPredicted RBP16.27■□□□□ 0.2
COL16A1-206ENST00000461217 POLR2BP30876 1174 aaKnown RBP16.27■□□□□ 0.2
COL16A1-206ENST00000461217 CTHP32929 405 aa16.27■□□□□ 0.2
COL16A1-206ENST00000461217 LPAL2Q16609 132 aa16.27■□□□□ 0.2
COL16A1-206ENST00000461217 RSPO4Q2I0M5 234 aaPredicted RBP16.27■□□□□ 0.2
COL16A1-206ENST00000461217 PRR23BQ6ZRT6 265 aa16.27■□□□□ 0.2
COL16A1-206ENST00000461217 LRRTM3Q86VH5 581 aa16.27■□□□□ 0.2
COL16A1-206ENST00000461217 RALGPS2Q86X27 583 aaPredicted RBP16.27■□□□□ 0.2
COL16A1-206ENST00000461217 BRSK2Q8IWQ3 736 aa16.27■□□□□ 0.2
COL16A1-206ENST00000461217 CACTINQ8WUQ7 758 aaKnown RBP16.27■□□□□ 0.2
COL16A1-206ENST00000461217 PANK2Q9BZ23 570 aa16.27■□□□□ 0.2
COL16A1-206ENST00000461217 SMG9Q9H0W8 520 aaKnown RBP16.27■□□□□ 0.2
COL16A1-206ENST00000461217 THG1LQ9NWX6 298 aaKnown RBP16.27■□□□□ 0.2
COL16A1-206ENST00000461217 RBAKQ9NYW8 714 aaPredicted RBP16.27■□□□□ 0.2
COL16A1-206ENST00000461217 MAGED2Q9UNF1 606 aaPredicted RBP16.27■□□□□ 0.2
COL16A1-206ENST00000461217 AGAP1Q9UPQ3 857 aa16.27■□□□□ 0.2
COL16A1-206ENST00000461217 MYBPHLA2RUH7 354 aa16.26■□□□□ 0.19
COL16A1-206ENST00000461217 GOLGA8IPA6NC78 632 aa16.26■□□□□ 0.19
COL16A1-206ENST00000461217 GOLGA8JA6NMD2 632 aa16.26■□□□□ 0.19
COL16A1-206ENST00000461217 HUS1O60921 280 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms