RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 PRKD2Q9BZL6 878 aa12.99□□□□□ -0.33
ERGIC3-211ENST00000461043 SDCBP2Q9H190 292 aa12.99□□□□□ -0.33
ERGIC3-211ENST00000461043 SMYD3Q9H7B4 428 aa12.99□□□□□ -0.33
ERGIC3-211ENST00000461043 MMRN2Q9H8L6 949 aa12.99□□□□□ -0.33
ERGIC3-211ENST00000461043 RAB20Q9NX57 234 aa12.99□□□□□ -0.33
ERGIC3-211ENST00000461043 DDX43Q9NXZ2 648 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-211ENST00000461043 CDH22Q9UJ99 828 aa12.99□□□□□ -0.33
ERGIC3-211ENST00000461043 MTCL1Q9Y4B5 1905 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-211ENST00000461043 CUL9Q8IWT3 2517 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 CCDC195A0A1B0GUA6 201 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 P4HA2O15460 535 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 HNRNPA1P09651 372 aaKnown RBP eCLIP12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 CCDC192P0DO97 292 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 LMO2P25791 158 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 NOP14P78316 857 aaKnown RBP12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 MYL7Q01449 175 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 TYRO3Q06418 890 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 ADCY1Q08828 1119 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 SMARCB1Q12824 385 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 SLC39A12Q504Y0 691 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 INTS6LQ5JSJ4 861 aaKnown RBP12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 LIN9Q5TKA1 542 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 FAM171BQ6P995 826 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 CCDC149Q6ZUS6 474 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 MMS19Q96T76 1030 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 FUCA2Q9BTY2 467 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 TMLHEQ9NVH6 421 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 HSFX1Q9UBD0 423 aa12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 NXF1Q9UBU9 619 aaKnown RBP12.98□□□□□ -0.33
ERGIC3-211ENST00000461043 WEE2P0C1S8 567 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 P4HA1P13674 534 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 ACAT1P24752 427 aaKnown RBP12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 PCSK1P29120 753 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 MTHFRP42898 656 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 RAP1GAPP47736 663 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 CDH8P55286 799 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 TSPY1Q01534 308 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 INCA1Q0VD86 236 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 KCNH2Q12809 1159 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 CBX2Q14781 532 aaPredicted RBP12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 CCDC142Q17RM4 750 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 CDKAL1Q5VV42 579 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 CES5AQ6NT32 575 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 ATAD1Q8NBU5 361 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 LMO3Q8TAP4 145 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 C2orf15Q8WU43 125 aaKnown RBP12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 NECTIN4Q96NY8 510 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 PGLYRP2Q96PD5 576 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 NIF3L1Q9GZT8 377 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 CYP4F11Q9HBI6 524 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 CRTAC1Q9NQ79 661 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 CDH9Q9ULB4 789 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 FAM50BQ9Y247 325 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 NFE2L3Q9Y4A8 694 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 INSL5Q9Y5Q6 135 aa12.97□□□□□ -0.33
ERGIC3-211ENST00000461043 DENND4AQ7Z401 1863 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 MYBPHLA2RUH7 354 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 N4BP1O75113 896 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 AFPP02771 609 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 GNL1P36915 607 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 DUSP4Q13115 394 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 NCAPHQ15003 741 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 NFE2Q16621 373 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 SKOR2Q2VWA4 1001 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 PPM1LQ5SGD2 360 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 SCARA5Q6ZMJ2 495 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 DCP1BQ8IZD4 617 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 TTC9BQ8N6N2 239 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 SPPL2BQ8TCT7 592 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 RIPOR3Q96MK2 946 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 BPIFA3Q9BQP9 254 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 SYT15Q9BQS2 421 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 IMPG2Q9BZV3 1241 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 DNAJC25Q9H1X3 360 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 DPEP3Q9H4B8 488 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 POMKQ9H5K3 350 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 CYP3A43Q9HB55 503 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 ABCB6Q9NP58 842 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.96□□□□□ -0.336e-11■■■■■ 175.8
ERGIC3-211ENST00000461043 SAMSN1Q9NSI8 373 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 PRKAG3Q9UGI9 489 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 YIPF1Q9Y548 306 aa12.96□□□□□ -0.33
ERGIC3-211ENST00000461043 NCOR1O75376 2440 aa12.96□□□□□ -0.34
ERGIC3-211ENST00000461043 C2orf16Q68DN1 1984 aa12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 C19orf67A6NJJ6 358 aa12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 PRRG1O14668 218 aa12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 CCL16O15467 120 aa12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 ATP2C2O75185 946 aa12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 LETM1O95202 739 aaPredicted RBP12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 PDGFRBP09619 1106 aa12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 ELF1P32519 619 aa12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 PSMC1P62191 440 aaKnown RBP12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 ZP2Q05996 745 aa12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 TPD52L1Q16890 204 aaPredicted RBP12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 CFAP221Q4G0U5 840 aa12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 MIIPQ5JXC2 388 aa12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 ATAT1Q5SQI0 421 aa12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 UNC93AQ86WB7 457 aa12.95□□□□□ -0.34
ERGIC3-211ENST00000461043 FAM114A1Q8IWE2 563 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms