RNA–Protein interactions for RNA: ENST00000458271.6

CSRP1-203, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 1,324 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-203ENST00000458271 SPPL2BQ8TCT7 592 aa13.36□□□□□ -0.27
CSRP1-203ENST00000458271 PARD3BQ8TEW8 1205 aa13.36□□□□□ -0.27
CSRP1-203ENST00000458271 C2orf15Q8WU43 125 aaKnown RBP13.36□□□□□ -0.27
CSRP1-203ENST00000458271 ERCC4Q92889 916 aaPredicted RBP13.36□□□□□ -0.27
CSRP1-203ENST00000458271 MCRS1Q96EZ8 462 aa13.36□□□□□ -0.27
CSRP1-203ENST00000458271 RPP25Q9BUL9 199 aaKnown RBP13.36□□□□□ -0.27
CSRP1-203ENST00000458271 TMLHEQ9NVH6 421 aa13.36□□□□□ -0.27
CSRP1-203ENST00000458271 GDE1Q9NZC3 331 aa13.36□□□□□ -0.27
CSRP1-203ENST00000458271 HSFX1Q9UBD0 423 aa13.36□□□□□ -0.27
CSRP1-203ENST00000458271 TRAF3IP3Q9Y228 551 aa13.36□□□□□ -0.27
CSRP1-203ENST00000458271 FRMD4BQ9Y2L6 1034 aa13.36□□□□□ -0.27
CSRP1-203ENST00000458271 ZDBF2Q9HCK1 2354 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 ZNF197O14709 1029 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 CST3P01034 146 aaPredicted RBP13.35□□□□□ -0.27
CSRP1-203ENST00000458271 CFHP08603 1231 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 SRFP11831 508 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 GJA1P17302 382 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 ATF6P18850 670 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 NR2F2P24468 414 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 LHX1P48742 406 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 DLG4P78352 724 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 CLDN10P78369 228 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 SMARCB1Q12824 385 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 BIRC3Q13489 604 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 CCDC142Q17RM4 750 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 INTS6LQ5JSJ4 861 aaKnown RBP13.35□□□□□ -0.27
CSRP1-203ENST00000458271 TDRD10Q5VZ19 366 aaKnown RBP13.35□□□□□ -0.27
CSRP1-203ENST00000458271 LIMS2Q7Z4I7 341 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 TMC8Q8IU68 726 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 PIP4P2Q8N4L2 257 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 LEMD2Q8NC56 503 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 SPATA18Q8TC71 538 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 KBTBD7Q8WVZ9 684 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 PSMG2Q969U7 264 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 MMS19Q96T76 1030 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 KXD1Q9BQD3 176 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 ACBD6Q9BR61 282 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 RMND1Q9NWS8 449 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 FBXL21Q9UKT6 434 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 PCDHB5Q9Y5E4 795 aa13.35□□□□□ -0.27
CSRP1-203ENST00000458271 GABRDO14764 452 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 PHACTR2O75167 634 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 GADD45BO75293 160 aaPredicted RBP13.34□□□□□ -0.27
CSRP1-203ENST00000458271 MOSPD3O75425 235 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 AKAP3O75969 853 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 MICAL2O94851 1124 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 CLSTN1O94985 981 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 PCSK1P29120 753 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 TUFMP49411 452 aaKnown RBP13.34□□□□□ -0.27
CSRP1-203ENST00000458271 VCPP55072 806 aaKnown RBP13.34□□□□□ -0.27
CSRP1-203ENST00000458271 MYL6P60660 151 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 TNNC1P63316 161 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 TRPC3Q13507 836 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 TEAD2Q15562 447 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 NFE2Q16621 373 aaPredicted RBP13.34□□□□□ -0.27
CSRP1-203ENST00000458271 NFIL3Q16649 462 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 ZCWPW2Q504Y3 356 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 ITIH5Q86UX2 942 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 SIX5Q8N196 739 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 SHKBP1Q8TBC3 707 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 FAM200AQ8TCP9 573 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 TIGD1Q96MW7 591 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 GSDMAQ96QA5 445 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 PKMYT1Q99640 499 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 PI4K2AQ9BTU6 479 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 LRRC3Q9BY71 257 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 XYLT2Q9H1B5 865 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 ZNF334Q9HCZ1 680 aaPredicted RBP13.34□□□□□ -0.27
CSRP1-203ENST00000458271 HOOK1Q9UJC3 728 aaKnown RBP13.34□□□□□ -0.27
CSRP1-203ENST00000458271 GTF3C4Q9UKN8 822 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 ASB3Q9Y575 518 aa13.34□□□□□ -0.27
CSRP1-203ENST00000458271 MUC6Q6W4X9 2439 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 A0A1W2PRU2 124 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 KINO60870 393 aaKnown RBP13.33□□□□□ -0.28
CSRP1-203ENST00000458271 SMC2O95347 1197 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 HAPLN1P10915 354 aaPredicted RBP13.33□□□□□ -0.28
CSRP1-203ENST00000458271 WARSP23381 471 aaKnown RBP13.33□□□□□ -0.28
CSRP1-203ENST00000458271 FCARP24071 287 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 LMO2P25791 158 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 ANP32AP39687 249 aaKnown RBP13.33□□□□□ -0.28
CSRP1-203ENST00000458271 AP3M2P53677 418 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 PSMC1P62191 440 aaKnown RBP13.33□□□□□ -0.28
CSRP1-203ENST00000458271 VEPH1Q14D04 833 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 WDR72Q3MJ13 1102 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 FAM78AQ5JUQ0 283 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 DPH6Q7L8W6 267 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 DNAJB7Q7Z6W7 309 aaPredicted RBP13.33□□□□□ -0.28
CSRP1-203ENST00000458271 SPATA20Q8TB22 786 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 TMC2Q8TDI7 906 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 GPR152Q8TDT2 470 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 GIPC2Q8TF65 315 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 SMARCE1Q969G3 411 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 SYAP1Q96A49 352 aaPredicted RBP13.33□□□□□ -0.28
CSRP1-203ENST00000458271 ZSWIM3Q96MP5 696 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 SYT15Q9BQS2 421 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 MRPL45Q9BRJ2 306 aaKnown RBP13.33□□□□□ -0.28
CSRP1-203ENST00000458271 MFSD1Q9H3U5 465 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 SLITRK6Q9H5Y7 841 aa13.33□□□□□ -0.28
CSRP1-203ENST00000458271 ABCB6Q9NP58 842 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms