RNA–Protein interactions for RNA: ENST00000456946.6

TRIM17-205, Transcript of tripartite motif containing 17, humanhuman

TSL 1 (best) BASIC

Gene TRIM17, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17-205ENST00000456946 LACRTQ9GZZ8 138 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 TIMM13Q9Y5L4 95 aaPredicted RBP17.1■□□□□ 0.33
TRIM17-205ENST00000456946 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 CHD9Q3L8U1 2897 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 CYB561D2O14569 222 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 FGF18O76093 207 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 STAU1O95793 577 aaKnown RBP17.1■□□□□ 0.33
TRIM17-205ENST00000456946 PPM1AP35813 382 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 SMAD3P84022 425 aaKnown RBP17.1■□□□□ 0.33
TRIM17-205ENST00000456946 CEP57Q86XR8 500 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 PDCL2Q8N4E4 241 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 KAT5Q92993 513 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 TIFAQ96CG3 184 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 B3GALT6Q96L58 329 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 NIF3L1Q9GZT8 377 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 SMYD3Q9H7B4 428 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 VRTNQ9H8Y1 702 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 SIX2Q9NPC8 291 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 TFR2Q9UP52 801 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 RWDD3Q9Y3V2 267 aa17.1■□□□□ 0.33
TRIM17-205ENST00000456946 SF3B1O75533 1304 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRIM17-205ENST00000456946 TRAPPC3O43617 180 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 RRP9O43818 475 aaKnown RBP17.09■□□□□ 0.33
TRIM17-205ENST00000456946 HUS1O60921 280 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 MAGEA1P43355 309 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 AARSP49588 968 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRIM17-205ENST00000456946 ERCC6LQ2NKX8 1250 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 HABP4Q5JVS0 413 aaKnown RBP17.09■□□□□ 0.33
TRIM17-205ENST00000456946 FAM171A1Q5VUB5 890 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 PHLDB3Q6NSJ2 640 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 TAS1R1Q7RTX1 841 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 UBXN4Q92575 508 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 SUSD3Q96L08 255 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 SPAG5Q96R06 1193 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 ARID3AQ99856 593 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 VN1R3Q9BXE9 311 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 ALG13Q9NP73 1137 aaKnown RBP17.09■□□□□ 0.33
TRIM17-205ENST00000456946 L1RE1Q9UN81 338 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 FHOD1Q9Y613 1164 aa17.09■□□□□ 0.33
TRIM17-205ENST00000456946 CARNS1A5YM72 827 aa17.08■□□□□ 0.32
TRIM17-205ENST00000456946 ODC1P11926 461 aa17.08■□□□□ 0.32
TRIM17-205ENST00000456946 P4HA1P13674 534 aa17.08■□□□□ 0.32
TRIM17-205ENST00000456946 TKTP29401 623 aaKnown RBP17.08■□□□□ 0.32
TRIM17-205ENST00000456946 ASPAP45381 313 aa17.08■□□□□ 0.32
TRIM17-205ENST00000456946 CDH8P55286 799 aa17.08■□□□□ 0.32
TRIM17-205ENST00000456946 ERVK-21P61565 698 aa17.08■□□□□ 0.32
TRIM17-205ENST00000456946 KLHL30Q0D2K2 578 aa17.08■□□□□ 0.32
TRIM17-205ENST00000456946 ARNTL2Q8WYA1 636 aa17.08■□□□□ 0.32
TRIM17-205ENST00000456946 UBE2TQ9NPD8 197 aaPredicted RBP17.08■□□□□ 0.32
TRIM17-205ENST00000456946 LUC7LQ9NQ29 371 aaKnown RBP17.08■□□□□ 0.32
TRIM17-205ENST00000456946 GDAP2Q9NXN4 497 aa17.08■□□□□ 0.32
TRIM17-205ENST00000456946 APEX2Q9UBZ4 518 aa17.08■□□□□ 0.32
TRIM17-205ENST00000456946 BZW2Q9Y6E2 419 aaKnown RBP17.08■□□□□ 0.32
TRIM17-205ENST00000456946 VWA8A3KMH1 1905 aa17.08■□□□□ 0.32
TRIM17-205ENST00000456946 M0QZQ0 153 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 SOX1O00570 391 aaPredicted RBP17.07■□□□□ 0.32
TRIM17-205ENST00000456946 PJA2O43164 708 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 WEE2P0C1S8 567 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 CD58P19256 250 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 KRT17Q04695 432 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 CUL2Q13617 745 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 ARHGAP44Q17R89 818 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 SOWAHAQ2M3V2 549 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 GPIHBP1Q8IV16 184 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 CEP112Q8N8E3 955 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 APPL2Q8NEU8 664 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 FBXO22Q8NEZ5 403 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 SECISBP2LQ93073 1101 aaKnown RBP17.07■□□□□ 0.32
TRIM17-205ENST00000456946 SAMD11Q96NU1 681 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 SDCBP2Q9H190 292 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 AJAP1Q9UKB5 411 aaPredicted RBP17.07■□□□□ 0.32
TRIM17-205ENST00000456946 DAAM1Q9Y4D1 1078 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 TSC2P49815 1807 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 CA8P35219 290 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 GFPT1Q06210 699 aaPredicted RBP17.07■□□□□ 0.32
TRIM17-205ENST00000456946 ELAVL2Q12926 359 aaKnown RBP17.07■□□□□ 0.32
TRIM17-205ENST00000456946 WHAMMP3Q1A5X7 153 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 WSCD1Q658N2 575 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 ADGRF2Q8IZF7 708 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 MRPL45Q9BRJ2 306 aaKnown RBP17.07■□□□□ 0.32
TRIM17-205ENST00000456946 PLVAPQ9BX97 442 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 PDCL3Q9H2J4 239 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 DNAJC12Q9UKB3 198 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 PCDHB8Q9UN66 801 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 CDH23Q9H251 3354 aa17.07■□□□□ 0.32
TRIM17-205ENST00000456946 SZT2Q5T011 3432 aa17.06■□□□□ 0.32
TRIM17-205ENST00000456946 CHD7Q9P2D1 2997 aa17.06■□□□□ 0.32
TRIM17-205ENST00000456946 C2CD2LO14523 706 aa17.06■□□□□ 0.32
TRIM17-205ENST00000456946 SOD2P04179 222 aa17.06■□□□□ 0.32
TRIM17-205ENST00000456946 PAX3P23760 479 aa17.06■□□□□ 0.32
TRIM17-205ENST00000456946 JAM2P57087 298 aa17.06■□□□□ 0.32
TRIM17-205ENST00000456946 AMPD2Q01433 879 aa17.06■□□□□ 0.32
TRIM17-205ENST00000456946 PLCB3Q01970 1234 aa17.06■□□□□ 0.32
TRIM17-205ENST00000456946 ARID5AQ03989 594 aa17.06■□□□□ 0.32
TRIM17-205ENST00000456946 SLC18A3Q16572 532 aa17.06■□□□□ 0.32
TRIM17-205ENST00000456946 RTP2Q5QGT7 225 aa17.06■□□□□ 0.32
TRIM17-205ENST00000456946 IQCEQ6IPM2 695 aa17.06■□□□□ 0.32
TRIM17-205ENST00000456946 IRF2BP2Q7Z5L9 587 aa17.06■□□□□ 0.32
TRIM17-205ENST00000456946 DDX53Q86TM3 631 aaKnown RBP17.06■□□□□ 0.32
TRIM17-205ENST00000456946 VPS52Q8N1B4 723 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms