RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 SPATA6Q9NWH7 488 aaPredicted RBP23.29■■□□□ 1.32
C9orf3-208ENST00000451893 ABI2Q9NYB9 513 aaPredicted RBP23.29■■□□□ 1.32
C9orf3-208ENST00000451893 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.28■■□□□ 1.32
C9orf3-208ENST00000451893 FAM170BA6NMN3 283 aa23.28■■□□□ 1.32
C9orf3-208ENST00000451893 SOAT2O75908 522 aa23.28■■□□□ 1.32
C9orf3-208ENST00000451893 PSMC3P17980 439 aa23.28■■□□□ 1.32
C9orf3-208ENST00000451893 GDI1P31150 447 aa23.28■■□□□ 1.32
C9orf3-208ENST00000451893 CDR1P51861 262 aa23.28■■□□□ 1.32
C9orf3-208ENST00000451893 SMARCB1Q12824 385 aa23.28■■□□□ 1.32
C9orf3-208ENST00000451893 WSCD1Q658N2 575 aa23.28■■□□□ 1.32
C9orf3-208ENST00000451893 ZC3H14Q6PJT7 736 aaKnown RBP23.28■■□□□ 1.32
C9orf3-208ENST00000451893 OR10T2Q8NGX3 314 aa23.28■■□□□ 1.32
C9orf3-208ENST00000451893 C2orf15Q8WU43 125 aaKnown RBP23.28■■□□□ 1.32
C9orf3-208ENST00000451893 E2F7Q96AV8 911 aa23.28■■□□□ 1.32
C9orf3-208ENST00000451893 ZCWPW1Q9H0M4 648 aa23.28■■□□□ 1.32
C9orf3-208ENST00000451893 MAGEF1Q9HAY2 307 aa23.28■■□□□ 1.32
C9orf3-208ENST00000451893 HEBP1Q9NRV9 189 aa23.28■■□□□ 1.32
C9orf3-208ENST00000451893 GOLGA6L3A6NEY3 463 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 ZNF263O14978 683 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 TNNC2P02585 160 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 CD72P21854 359 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 EPHA5P54756 1037 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 SURF1Q15526 300 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 DNAJB7Q7Z6W7 309 aaPredicted RBP23.27■■□□□ 1.32
C9orf3-208ENST00000451893 C1orf210Q8IVY1 113 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 SHKBP1Q8TBC3 707 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 SPPL2BQ8TCT7 592 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 CSGALNACT1Q8TDX6 532 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 PSMG2Q969U7 264 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 NELL2Q99435 816 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 FGFBP2Q9BYJ0 223 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 TRIM9Q9C026 710 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 CRISPLD1Q9H336 500 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 LTB4R2Q9NPC1 389 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 HSFX1Q9UBD0 423 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 ITGA11Q9UKX5 1188 aa23.27■■□□□ 1.32
C9orf3-208ENST00000451893 ZNF233A6NK53 670 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 PROB1E7EW31 1015 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 POLR2DO15514 142 aaKnown RBP23.26■■□□□ 1.31
C9orf3-208ENST00000451893 LAMTOR5O43504 91 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 CLSTN1O94985 981 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 GABRR2P28476 465 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 VIPR2P41587 438 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 RBP5P82980 135 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 MYL7Q01449 175 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 MYO1EQ12965 1108 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 CEP57L1Q8IYX8 460 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 TTC9BQ8N6N2 239 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 ZSWIM3Q96MP5 696 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 PDE11AQ9HCR9 933 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 KBTBD4Q9NVX7 518 aa23.26■■□□□ 1.31
C9orf3-208ENST00000451893 MAN2B1O00754 1011 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 LRRN2O75325 713 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 VNN2O95498 520 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 CCDC192P0DO97 292 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 FCARP24071 287 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 MAGEA9P43362 315 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 FAM26FQ5R3K3 315 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 GPR158Q5T848 1215 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 VITQ6UXI7 678 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 C1orf127Q8N9H9 656 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 ZSWIM2Q8NEG5 633 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 GIPC2Q8TF65 315 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 HPS3Q969F9 1004 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 LPIN3Q9BQK8 851 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 MTMR12Q9C0I1 747 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 DNAJC25Q9H1X3 360 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 TSPY26PQ9H489 355 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 NDRG2Q9UN36 371 aaKnown RBP23.25■■□□□ 1.31
C9orf3-208ENST00000451893 PCDHB5Q9Y5E4 795 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 SNX9Q9Y5X1 595 aa23.25■■□□□ 1.31
C9orf3-208ENST00000451893 TICRRQ7Z2Z1 1910 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 PRR23AA6NEV1 266 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 HEPACAM2A8MVW5 462 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 EIF3DO15371 548 aaKnown RBP eCLIP23.24■■□□□ 1.31
C9orf3-208ENST00000451893 CAVIN2O95810 425 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 CDC25CP30307 473 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 E2F4Q16254 413 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 CAMK4Q16566 473 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 KRBA2Q6ZNG9 492 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 HS2ST1Q7LGA3 356 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 ASCL5Q7RTU5 278 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 TMC8Q8IU68 726 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 LRRC52Q8N7C0 313 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 HINFPQ9BQA5 517 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 OSBPL6Q9BZF3 934 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 KIAA1586Q9HCI6 787 aa23.24■■□□□ 1.31
C9orf3-208ENST00000451893 MOSPD3O75425 235 aa23.23■■□□□ 1.31
C9orf3-208ENST00000451893 NFE2Q16621 373 aaPredicted RBP23.23■■□□□ 1.31
C9orf3-208ENST00000451893 LMBRD2Q68DH5 695 aaPredicted RBP23.23■■□□□ 1.31
C9orf3-208ENST00000451893 SASS6Q6UVJ0 657 aa23.23■■□□□ 1.31
C9orf3-208ENST00000451893 MFSD6LQ8IWD5 586 aa23.23■■□□□ 1.31
C9orf3-208ENST00000451893 NELFCDQ8IXH7 590 aa23.23■■□□□ 1.31
C9orf3-208ENST00000451893 TMEM86AQ8N2M4 240 aa23.23■■□□□ 1.31
C9orf3-208ENST00000451893 FNBP1Q96RU3 617 aa23.23■■□□□ 1.31
C9orf3-208ENST00000451893 DDX23Q9BUQ8 820 aaKnown RBP23.23■■□□□ 1.31
C9orf3-208ENST00000451893 ZNF334Q9HCZ1 680 aaPredicted RBP23.23■■□□□ 1.31
C9orf3-208ENST00000451893 DDX43Q9NXZ2 648 aaKnown RBP23.23■■□□□ 1.31
C9orf3-208ENST00000451893 HSPBP1Q9NZL4 362 aa23.23■■□□□ 1.31
C9orf3-208ENST00000451893 ZNF638Q14966 1978 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms