RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 DDX43Q9NXZ2 648 aaKnown RBP13.93□□□□□ -0.18
VPS33A-202ENST00000451053 HMGXB4Q9UGU5 601 aa13.93□□□□□ -0.18
VPS33A-202ENST00000451053 ITIH6Q6UXX5 1313 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 OR6C75A6NL08 312 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 ATP2C2O75185 946 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 ADH1AP07327 375 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 PDGFRBP09619 1106 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 FAM163BP0C2L3 166 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 CD58P19256 250 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 GNL1P36915 607 aaPredicted RBP13.92□□□□□ -0.18
VPS33A-202ENST00000451053 LHX1P48742 406 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 CDR1P51861 262 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 RBM10P98175 930 aaKnown RBP13.92□□□□□ -0.18
VPS33A-202ENST00000451053 ROR1Q01973 937 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 ORC1Q13415 861 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 PTPN21Q16825 1174 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 CCDC142Q17RM4 750 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 RRAGAQ7L523 313 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 PALB2Q86YC2 1186 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 VSTM4Q8IW00 320 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 UBR7Q8N806 425 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 PPP2R3CQ969Q6 453 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 FAXDC2Q96IV6 333 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 PDLIM2Q96JY6 352 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 ERGIC2Q96RQ1 377 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 LSM14BQ9BX40 385 aaKnown RBP13.92□□□□□ -0.18
VPS33A-202ENST00000451053 ZCWPW1Q9H0M4 648 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 DPEP3Q9H4B8 488 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 IGFLR1Q9H665 355 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 CYP3A43Q9HB55 503 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 AJAP1Q9UKB5 411 aaPredicted RBP13.92□□□□□ -0.18
VPS33A-202ENST00000451053 SIK3Q9Y2K2 1263 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 STXBP5LQ9Y2K9 1186 aa13.92□□□□□ -0.18
VPS33A-202ENST00000451053 MYO7AQ13402 2215 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 PLXNA3P51805 1871 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 WDR27A2RRH5 827 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 A8MXQ7 604 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 LINC01565O15544 149 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 TPM1P09493 284 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 SPATA31D3P0C874 917 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 CPB1P15086 417 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 EPCAMP16422 314 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 TBXAS1P24557 533 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-202ENST00000451053 PCSK1P29120 753 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 CLCN4P51793 760 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 NDST1P52848 882 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 PSMC1P62191 440 aaKnown RBP13.91□□□□□ -0.18
VPS33A-202ENST00000451053 INCA1Q0VD86 236 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 RAB33AQ14088 237 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 TRIM14Q14142 442 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 SYCP1Q15431 976 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 CCDC85BQ15834 202 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-202ENST00000451053 INTS6LQ5JSJ4 861 aaKnown RBP13.91□□□□□ -0.18
VPS33A-202ENST00000451053 SPECC1LQ69YQ0 1117 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 LLGL2Q6P1M3 1020 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 SPATA31D4Q6ZUB0 917 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 LRRTM3Q86VH5 581 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 VN1R2Q8NFZ6 395 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 WHAMMQ8TF30 809 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 SLC22A17Q8WUG5 538 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 KREMEN1Q96MU8 473 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 TWNKQ96RR1 684 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 PPP1R9BQ96SB3 815 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 PKMYT1Q99640 499 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 LPIN3Q9BQK8 851 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 SYT15Q9BQS2 421 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 ACBD6Q9BR61 282 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 NUP58Q9BVL2 599 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 OXCT2Q9BYC2 517 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-202ENST00000451053 UBE2TQ9NPD8 197 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-202ENST00000451053 CISHQ9NSE2 258 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 TMLHEQ9NVH6 421 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 IMPACTQ9P2X3 320 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 APEX2Q9UBZ4 518 aa13.91□□□□□ -0.18
VPS33A-202ENST00000451053 BARX2Q9UMQ3 279 aaPredicted RBP13.91□□□□□ -0.18
VPS33A-202ENST00000451053 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.91□□□□□ -0.18
VPS33A-202ENST00000451053 PRRC2BQ5JSZ5 2229 aaKnown RBP13.91□□□□□ -0.18
VPS33A-202ENST00000451053 TGM5O43548 720 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 CILPO75339 1184 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 VNN2O95498 520 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 ACO1P21399 889 aaKnown RBP13.9□□□□□ -0.18
VPS33A-202ENST00000451053 TSPY1Q01534 308 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 GCNT1Q02742 428 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 SLC39A12Q504Y0 691 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 KLHDC7AQ5VTJ3 777 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 LILRA6Q6PI73 481 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 RNF19BQ6ZMZ0 732 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 TMC6Q7Z403 805 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 PPM1EQ8WY54 764 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 PCMTD1Q96MG8 357 aaPredicted RBP13.9□□□□□ -0.18
VPS33A-202ENST00000451053 CDCA3Q99618 268 aaPredicted RBP13.9□□□□□ -0.18
VPS33A-202ENST00000451053 ELOVL4Q9GZR5 314 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 GANQ9H2C0 597 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 CRTAC1Q9NQ79 661 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 CDH9Q9ULB4 789 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 HCFC2Q9Y5Z7 792 aa13.9□□□□□ -0.18
VPS33A-202ENST00000451053 MYBPHLA2RUH7 354 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 EPHB6O15197 1021 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 NOL4O94818 638 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 ABLIM3O94929 683 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms