RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 GRIA2P42262 883 aa14.17□□□□□ -0.14
SYNGAP1-204ENST00000449372 HADHBP55084 474 aaKnown RBP14.17□□□□□ -0.14
SYNGAP1-204ENST00000449372 IL9RQ01113 521 aa14.17□□□□□ -0.14
SYNGAP1-204ENST00000449372 DNAJC3Q13217 504 aa14.17□□□□□ -0.14
SYNGAP1-204ENST00000449372 VPS52Q8N1B4 723 aa14.17□□□□□ -0.14
SYNGAP1-204ENST00000449372 DEPTORQ8TB45 409 aa14.17□□□□□ -0.14
SYNGAP1-204ENST00000449372 PARVGQ9HBI0 331 aa14.17□□□□□ -0.14
SYNGAP1-204ENST00000449372 GINM1Q9NU53 330 aa14.17□□□□□ -0.14
SYNGAP1-204ENST00000449372 WDR90Q96KV7 1748 aa14.17□□□□□ -0.14
SYNGAP1-204ENST00000449372 HNRNPCL1O60812 293 aaKnown RBP14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 PDE5AO76074 875 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 ACTN1P12814 892 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 HDAC4P56524 1084 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 SAPCD2Q86UD0 394 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 GAB3Q8WWW8 586 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 HSPBAP1Q96EW2 488 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 BTBD10Q9BSF8 475 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 FOXP3Q9BZS1 431 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 TUFT1Q9NNX1 390 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 GYG2O15488 501 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 GSC2O15499 205 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 EXOC3O60645 756 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 CFBP00751 764 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 HARSP12081 509 aaKnown RBP14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 EMP3P54852 163 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 CACNB1Q02641 598 aaPredicted RBP14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 THOC5Q13769 683 aaKnown RBP14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 ZYXQ15942 572 aaKnown RBP14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 EAPPQ56P03 285 aaPredicted RBP14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 DPY19L2P1Q6NXN4 242 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 SLC30A10Q6XR72 485 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 ANKRD35Q8N283 1001 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 REEP2Q9BRK0 252 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 TRAIPQ9BWF2 469 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 TIMMDC1Q9NPL8 285 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 GRHL1Q9NZI5 618 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 VPS41P49754 854 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 THOC7Q6I9Y2 204 aaKnown RBP14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 TREML1Q86YW5 311 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 DQX1Q8TE96 717 aaKnown RBP14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 ZNF341Q9BYN7 854 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 BCAS3Q9H6U6 928 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 TBCCD1Q9NVR7 557 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 WRAP73Q9P2S5 460 aaPredicted RBP14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 APEX2Q9UBZ4 518 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 PCYOX1Q9UHG3 505 aa14.16□□□□□ -0.14
SYNGAP1-204ENST00000449372 WDR46O15213 610 aaKnown RBP14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 BIRC5O15392 142 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 ACSL3O95573 720 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 FMO5P49326 533 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 SERPINB8P50452 374 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 KLHL35Q6PF15 583 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 FAM178BQ8IXR5 827 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 LPAR1Q92633 364 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 ZNF112Q9UJU3 913 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 GSTTP1A0A1W2PQM5 241 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 HALP42357 657 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 RPL21P46778 160 aaKnown RBP14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 PDE1BQ01064 536 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 DGKZQ13574 1117 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 MOGSQ13724 837 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 CEP55Q53EZ4 464 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 RFX8Q6ZV50 586 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 SLC35C1Q96A29 364 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 RUSC1Q9BVN2 902 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 TMEM206Q9H813 350 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 FAIMQ9NVQ4 179 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 TUBA8Q9NY65 449 aaPredicted RBP14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 WDR81Q562E7 1941 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 ARFIP2P53365 341 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 JAM2P57087 298 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 GEMIN4P57678 1058 aaKnown RBP14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 GLYCTKQ8IVS8 523 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 JDP2Q8WYK2 163 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 TRIM11Q96F44 468 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 FIZ1Q96SL8 496 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 INTS2Q9H0H0 1204 aaKnown RBP14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 SLC38A10Q9HBR0 1119 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 ERVK-5Q9HDB9 667 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 SAR1AQ9NR31 198 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 PPP1R9AQ9ULJ8 1098 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 HEY1Q9Y5J3 304 aa14.15□□□□□ -0.14
SYNGAP1-204ENST00000449372 TMEM110-MUSTN1A8MSY1 372 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 ARP10275 920 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 ITGA7Q13683 1181 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 PPP1R2P3Q6NXS1 205 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 CCDC125Q86Z20 511 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 FNDC8Q8TC99 324 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 NACC1Q96RE7 527 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 AGPAT1Q99943 283 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 SLCO1B3Q9NPD5 702 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 TRPV5Q9NQA5 729 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 ASIC3Q9UHC3 531 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 TCEAL9Q9UHQ7 104 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 ITGB5P18084 799 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 ITIH2P19823 946 aa14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 GMPSP49915 693 aaPredicted RBP14.14□□□□□ -0.15
SYNGAP1-204ENST00000449372 COG7P83436 770 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms