RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 CBY1Q9Y3M2 126 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ASB4Q9Y574 426 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 PCDHA13Q9Y5I0 950 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SLC22A2O15244 555 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 PEX11AO75192 247 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 APOC1P02654 83 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 COPZ1P61923 177 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SLC7A5Q01650 507 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 KLHL30Q0D2K2 578 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 LRRC74AQ0VAA2 488 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TOP3AQ13472 1001 aaPredicted RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 TMC3Q7Z5M5 1100 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 NUDCD3Q8IVD9 361 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 AMER2Q8N7J2 671 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TGFBRAP1Q8WUH2 860 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 KIFC1Q9BW19 673 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 KBTBD4Q9NVX7 518 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 KCNK4Q9NYG8 393 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ARMCX3Q9UH62 379 aaPredicted RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 SNX7Q9UNH6 387 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 MAPRE3Q9UPY8 281 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 PCDHB4Q9Y5E5 795 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 H7C0S8 307 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 BUB1O43683 1085 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SORBS3O60504 671 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 RGS20O76081 388 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 MAP3K6O95382 1288 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 H6PDO95479 791 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ATP1A3P13637 1013 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 INHBEP58166 350 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 PDK3Q15120 406 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ZBED5Q49AG3 693 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TTMPQ5BVD1 217 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TMTC4Q5T4D3 741 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 USPL1Q5W0Q7 1092 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 PLEKHA7Q6IQ23 1121 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 DHRS4L2Q6PKH6 230 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 PAOXQ6QHF9 649 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 WAPLQ7Z5K2 1190 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ZNF677Q86XU0 584 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SFRP1Q8N474 314 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 NMD3Q96D46 503 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 ZNF347Q96SE7 839 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 GGNBP2Q9H3C7 697 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 C1orf115Q9H7X2 142 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 FAM86C1Q9NVL1 165 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ABCA6Q8N139 1617 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 C15orf38-AP3S2A0A0A6YYH1 394 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TRDMT1O14717 391 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 DENRO43583 198 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 IMPDH1P20839 514 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 KCNJ2P63252 427 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 MRPS9P82933 396 aaKnown RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 E2F2Q14209 437 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SELPLGQ14242 412 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TCP11X2Q5H9J9 407 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 RNF220Q5VTB9 566 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TRAF7Q6Q0C0 670 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 ELMOD2Q8IZ81 293 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 TSPAN14Q8NG11 270 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 NKX2-3Q8TAU0 364 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 KBTBD7Q8WVZ9 684 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 BORCS6Q96GS4 357 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 VCPIP1Q96JH7 1222 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 CLEC4MQ9H2X3 399 aaPredicted RBP3.05□□□□□ -1.92
CHD9-203ENST00000447540 TXNDC16Q9P2K2 825 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 SLC4A4Q9Y6R1 1079 aa3.05□□□□□ -1.92
CHD9-203ENST00000447540 IQGAP3Q86VI3 1631 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TMEM120BA0PK00 339 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 SNPHO15079 494 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 SYNCRIPO60506 623 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 EXOC3O60645 756 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 BAMBIQ13145 260 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CAMK2BQ13554 666 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 PLCL1Q15111 1095 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 KRT31Q15323 416 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 SLC18A3Q16572 532 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 EXOC3L4Q17RC7 722 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 DGKKQ5KSL6 1271 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 EPS8L1Q8TE68 723 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 IFT43Q96FT9 208 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CEP170P1Q96L14 293 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 IFT22Q9H7X7 185 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 KRT84Q9NSB2 600 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 DDX18Q9NVP1 670 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 CLIC5Q9NZA1 410 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TSPYL4Q9UJ04 414 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TDRKHQ9Y2W6 561 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 GRIP1Q9Y3R0 1128 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ZNF175Q9Y473 711 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 PCDHB6Q9Y5E3 794 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ADGRB3O60242 1522 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 H3BM21 787 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 GYPCP04921 128 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ZCCHC18P0CG32 403 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CCNA2P20248 432 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 POLR2BP30876 1174 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 PDK4Q16654 411 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TRAPPC3LQ5T215 181 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 RSBN1Q5VWQ0 802 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms