RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 MTMR12Q9C0I1 747 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 TMEM206Q9H813 350 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 IL21Q9HBE4 155 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 PDE11AQ9HCR9 933 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 TMLHEQ9NVH6 421 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 L1RE1Q9UN81 338 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 FAM186AA6NE01 2351 aa19.61■□□□□ 0.73
COL9A1-205ENST00000447041 PPP6R2O75170 966 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 PRAMEF12O95522 483 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 FGF19O95750 216 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 HAPLN1P10915 354 aaPredicted RBP19.6■□□□□ 0.73
COL9A1-205ENST00000447041 FCHO2Q0JRZ9 810 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 BFSP1Q12934 665 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 MTAPQ13126 283 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 ARHGAP15Q53QZ3 475 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 LMBRD2Q68DH5 695 aaPredicted RBP19.6■□□□□ 0.73
COL9A1-205ENST00000447041 YAF2Q8IY57 180 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 GPD1LQ8N335 351 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 STKLD1Q8NE28 680 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 DHX58Q96C10 678 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 TRIM9Q9C026 710 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 PRMT8Q9NR22 394 aaPredicted RBP19.6■□□□□ 0.73
COL9A1-205ENST00000447041 KBTBD4Q9NVX7 518 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 OBSL1O75147 1896 aa19.6■□□□□ 0.73
COL9A1-205ENST00000447041 PTPRJQ12913 1337 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 KIF26AQ9ULI4 1882 aaPredicted RBP19.59■□□□□ 0.73
COL9A1-205ENST00000447041 DCHS1Q96JQ0 3298 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 SLC38A8A6NNN8 435 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 CHADO15335 359 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 KINO60870 393 aaKnown RBP19.59■□□□□ 0.73
COL9A1-205ENST00000447041 YEATS4O95619 227 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 KRT19P08727 400 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 CCNE1P24864 410 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 SOX9P48436 509 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 GPR15P49685 360 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 SMARCB1Q12824 385 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 SHC4Q6S5L8 630 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 DCP1BQ8IZD4 617 aaKnown RBP19.59■□□□□ 0.73
COL9A1-205ENST00000447041 CSGALNACT2Q8N6G5 542 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 CSGALNACT1Q8TDX6 532 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 CACTINQ8WUQ7 758 aaKnown RBP19.59■□□□□ 0.73
COL9A1-205ENST00000447041 ZFYVE19Q96K21 471 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 ZNF396Q96N95 335 aaPredicted RBP19.59■□□□□ 0.73
COL9A1-205ENST00000447041 CHRDQ9H2X0 955 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 DDX43Q9NXZ2 648 aaKnown RBP19.59■□□□□ 0.73
COL9A1-205ENST00000447041 SIX4Q9UIU6 781 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 ITGA11Q9UKX5 1188 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 PCDHB5Q9Y5E4 795 aa19.59■□□□□ 0.73
COL9A1-205ENST00000447041 RIF1Q5UIP0 2472 aaKnown RBP19.59■□□□□ 0.73
COL9A1-205ENST00000447041 HCRTO43612 131 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 TMEM191BP0C7N4 346 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 ACAT1P24752 427 aaKnown RBP19.58■□□□□ 0.72
COL9A1-205ENST00000447041 CDC25CP30307 473 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 HOXD13P35453 343 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 ASIC1P78348 528 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 TSPY1Q01534 308 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 CCDC142Q17RM4 750 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 FOXD4L6Q3SYB3 417 aaPredicted RBP19.58■□□□□ 0.72
COL9A1-205ENST00000447041 FOXD4L3Q6VB84 417 aaPredicted RBP19.58■□□□□ 0.72
COL9A1-205ENST00000447041 OSTM1Q86WC4 334 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 CBWD2Q8IUF1 395 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 LRRC52Q8N7C0 313 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 SUMF1Q8NBK3 374 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 SNX21Q969T3 373 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 GCNAQ96QF7 691 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 PI4K2AQ9BTU6 479 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 SMG9Q9H0W8 520 aaKnown RBP19.58■□□□□ 0.72
COL9A1-205ENST00000447041 CUEDC2Q9H467 287 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 TASP1Q9H6P5 420 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 SNX9Q9Y5X1 595 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 DENND4CQ5VZ89 1909 aa19.58■□□□□ 0.72
COL9A1-205ENST00000447041 DPYSL4O14531 572 aa19.57■□□□□ 0.72
COL9A1-205ENST00000447041 CUTAO60888 179 aa19.57■□□□□ 0.72
COL9A1-205ENST00000447041 HUS1O60921 280 aa19.57■□□□□ 0.72
COL9A1-205ENST00000447041 TAF12Q16514 161 aa19.57■□□□□ 0.72
COL9A1-205ENST00000447041 SDHAF4Q5VUM1 108 aa19.57■□□□□ 0.72
COL9A1-205ENST00000447041 STXBP4Q6ZWJ1 553 aa19.57■□□□□ 0.72
COL9A1-205ENST00000447041 TMEM150AQ86TG1 271 aa19.57■□□□□ 0.72
COL9A1-205ENST00000447041 OR5B17Q8NGF7 314 aa19.57■□□□□ 0.72
COL9A1-205ENST00000447041 TTC8Q8TAM2 541 aa19.57■□□□□ 0.72
COL9A1-205ENST00000447041 HINFPQ9BQA5 517 aa19.57■□□□□ 0.72
COL9A1-205ENST00000447041 LRRC27Q9C0I9 530 aa19.57■□□□□ 0.72
COL9A1-205ENST00000447041 LMAN1LQ9HAT1 526 aa19.57■□□□□ 0.72
COL9A1-205ENST00000447041 PCDHGA2Q9Y5H1 932 aa19.57■□□□□ 0.72
COL9A1-205ENST00000447041 PTPRZ1P23471 2315 aaPredicted RBP19.57■□□□□ 0.72
COL9A1-205ENST00000447041 PRPF40AO75400 957 aaKnown RBP19.56■□□□□ 0.72
COL9A1-205ENST00000447041 CHRNB1P11230 501 aa19.56■□□□□ 0.72
COL9A1-205ENST00000447041 HMGA1P17096 107 aaKnown RBP19.56■□□□□ 0.72
COL9A1-205ENST00000447041 KPNA1P52294 538 aaPredicted RBP19.56■□□□□ 0.72
COL9A1-205ENST00000447041 RBP5P82980 135 aa19.56■□□□□ 0.72
COL9A1-205ENST00000447041 WDR44Q5JSH3 913 aa19.56■□□□□ 0.72
COL9A1-205ENST00000447041 INTS6LQ5JSJ4 861 aaKnown RBP19.56■□□□□ 0.72
COL9A1-205ENST00000447041 EPM2AIP1Q7L775 607 aaPredicted RBP19.56■□□□□ 0.72
COL9A1-205ENST00000447041 ADGRF2Q8IZF7 708 aa19.56■□□□□ 0.72
COL9A1-205ENST00000447041 TMEM86AQ8N2M4 240 aa19.56■□□□□ 0.72
COL9A1-205ENST00000447041 DCLK2Q8N568 766 aa19.56■□□□□ 0.72
COL9A1-205ENST00000447041 ZBTB44Q8NCP5 570 aa19.56■□□□□ 0.72
COL9A1-205ENST00000447041 BPIFB1Q8TDL5 484 aa19.56■□□□□ 0.72
COL9A1-205ENST00000447041 LEO1Q8WVC0 666 aaPredicted RBP19.56■□□□□ 0.72
COL9A1-205ENST00000447041 NELL1Q92832 810 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms