RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 PPEF2O14830 753 aa17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 FSCN2O14926 492 aa17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 NPTXRO95502 500 aa17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 ETS1P14921 441 aa17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 RGS7P49802 495 aa17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 C1QBPQ07021 282 aaKnown RBP17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 MTMR3Q13615 1198 aa17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 ACVR2BQ13705 512 aa17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 ZNF484Q5JVG2 852 aa17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 PNMA8AQ86V59 439 aaPredicted RBP17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 SHCBP1Q8NEM2 672 aa17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 EPS8L3Q8TE67 593 aaKnown RBP17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 RAPGEF5Q92565 580 aa17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 CPXM1Q96SM3 734 aa17.79■□□□□ 0.44
LAPTM4B-201ENST00000445593 KAT6AQ92794 2004 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 PODXLO00592 558 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 IFNB1P01574 187 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 PSMA2P25787 234 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 SLC1A1P43005 524 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 AP3M2P53677 418 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 ZNF200P98182 395 aaPredicted RBP17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 EXOC8Q8IYI6 725 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 GLIS1Q8NBF1 620 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 HPDLQ96IR7 371 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 TINF2Q9BSI4 451 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 DCLK3Q9C098 648 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 ELOVL4Q9GZR5 314 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 VTA1Q9NP79 307 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 SNTG2Q9NY99 539 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 KLK14Q9P0G3 267 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 GRIN2DO15399 1336 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 BHMG1C9JSJ3 638 aaPredicted RBP17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 HCRTO43612 131 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 B4GALT4O60513 344 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 MMP3P08254 477 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 BEX3Q00994 111 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 TMEM132DQ14C87 1099 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 UBR7Q8N806 425 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 METTL5Q9NRN9 209 aaKnown RBP17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 FAM49BQ9NUQ9 324 aa17.78■□□□□ 0.44
LAPTM4B-201ENST00000445593 MGAMO43451 1857 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 AKAP5P24588 427 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 ADCY1Q08828 1119 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 CCL14Q16627 93 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 CDO1Q16878 200 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 CHADLQ6NUI6 762 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 ILDR2Q71H61 639 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 SELENOSQ9BQE4 189 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 EPB41L4BQ9H329 900 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 LRRC37A2A6NM11 1700 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 TMEM191CA6NGB0 347 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 TSPAN1O60635 241 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 PPFIA2O75334 1257 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 CYP2B6P20813 491 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 ITGA8P53708 1063 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 RAD23BP54727 409 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 NFX1Q12986 1120 aaKnown RBP17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 SURF1Q15526 300 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 MARCH8Q5T0T0 291 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 ZNF365Q70YC5 407 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 CATSPER4Q7RTX7 472 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 EIF2AQ9BY44 585 aaKnown RBP17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 IP6K2Q9UHH9 426 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 CNTN6Q9UQ52 1028 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 ZNF148Q9UQR1 794 aa17.77■□□□□ 0.44
LAPTM4B-201ENST00000445593 CALB1P05937 261 aa17.77■□□□□ 0.43
LAPTM4B-201ENST00000445593 ENPEPQ07075 957 aa17.77■□□□□ 0.43
LAPTM4B-201ENST00000445593 RAB6CQ53S08 254 aa17.77■□□□□ 0.43
LAPTM4B-201ENST00000445593 ACAP3Q96P50 834 aa17.77■□□□□ 0.43
LAPTM4B-201ENST00000445593 RAB6CQ9H0N0 254 aa17.77■□□□□ 0.43
LAPTM4B-201ENST00000445593 NDUFAB1O14561 156 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 EIF3HO15372 352 aaKnown RBP eCLIP17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 ASAP2O43150 1006 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 PPFIA4O75335 1185 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 KRT3P12035 628 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 ATF2P15336 505 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 TAF5Q15542 800 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 CLUL1Q15846 466 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 PLEKHH3Q7Z736 793 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 KATNBL1Q9H079 304 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 LRRC19Q9H756 370 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 DNPEPQ9ULA0 475 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 HMGB1P1B2RPK0 211 aaPredicted RBP17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 FNTAP49354 379 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 TNFAIP2Q03169 654 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 LONRF1Q17RB8 773 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 ICE2Q659A1 982 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 C2orf69Q8N8R5 385 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 SLC4A11Q8NBS3 891 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 C18orf25Q96B23 403 aaPredicted RBP17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 MRRFQ96E11 262 aaKnown RBP17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 ADPGKQ9BRR6 497 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 ADAM33Q9BZ11 813 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 PABPC3Q9H361 631 aaKnown RBP17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 SNX9Q9Y5X1 595 aa17.76■□□□□ 0.43
LAPTM4B-201ENST00000445593 MAGEB2O15479 319 aa17.75■□□□□ 0.43
LAPTM4B-201ENST00000445593 ERBB2P04626 1255 aa17.75■□□□□ 0.43
LAPTM4B-201ENST00000445593 NDST1P52848 882 aa17.75■□□□□ 0.43
LAPTM4B-201ENST00000445593 IFI35P80217 286 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms