RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 PIK3CAP42336 1068 aa16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 MXI1P50539 228 aa16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 STX17P56962 302 aa16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 PLD1Q13393 1074 aa16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 CCDC40Q4G0X9 1142 aa16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 INTS6LQ5JSJ4 861 aaKnown RBP16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 TCERG1LQ5VWI1 586 aa16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 OSTM1Q86WC4 334 aa16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 CCDC150Q8NCX0 1101 aa16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 FBXL13Q8NEE6 735 aa16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 SLC35C1Q96A29 364 aa16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 TMEM209Q96SK2 561 aa16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 SRRTQ9BXP5 876 aaKnown RBP16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 CDH9Q9ULB4 789 aa16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 COQ4Q9Y3A0 265 aa16.1■□□□□ 0.17
CSNK1E-210ENST00000442216 XIRP2A4UGR9 3374 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 WEE2P0C1S8 567 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 PTMSP20962 102 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 GNL1P36915 607 aaPredicted RBP16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 TUFMP49411 452 aaKnown RBP16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 MAPRE1Q15691 268 aaKnown RBP16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 SLC39A12Q504Y0 691 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 DCAF17Q5H9S7 520 aaPredicted RBP16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 CCDC183Q5T5S1 534 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 LRRTM3Q86VH5 581 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 GJD3Q8N144 294 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 ELMOD1Q8N336 334 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 PLCD3Q8N3E9 789 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 TAS1R2Q8TE23 839 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 PKMYT1Q99640 499 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 SNX25Q9H3E2 840 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 ABCB6Q9NP58 842 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 AVENQ9NQS1 362 aaPredicted RBP16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 NXF1Q9UBU9 619 aaKnown RBP16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 CDH22Q9UJ99 828 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 CLUHO75153 1309 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 MYO10Q9HD67 2058 aa16.09■□□□□ 0.17
CSNK1E-210ENST00000442216 DENND4CQ5VZ89 1909 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 P4HA2O15460 535 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 CCL16O15467 120 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 N4BP1O75113 896 aaKnown RBP16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 CCDC192P0DO97 292 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 PTPN2P17706 415 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 NOP14P78316 857 aaKnown RBP16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 DUSP4Q13115 394 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 DPCR1Q3MIW9 517 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 FAM171BQ6P995 826 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 OTOP3Q7RTS5 596 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 ATAD1Q8NBU5 361 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 FEZF2Q8TBJ5 459 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 FUBP3Q96I24 572 aaKnown RBP eCLIP16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 NECAB3Q96P71 396 aaPredicted RBP16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 PGLYRP2Q96PD5 576 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 SYT15Q9BQS2 421 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 MRPL45Q9BRJ2 306 aaKnown RBP16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 FAM124BQ9H5Z6 455 aaPredicted RBP16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 MMRN2Q9H8L6 949 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 RAB20Q9NX57 234 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 YIPF1Q9Y548 306 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 ASB3Q9Y575 518 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 PCDHB5Q9Y5E4 795 aa16.08■□□□□ 0.16
CSNK1E-210ENST00000442216 GREB1Q4ZG55 1949 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 MYH10P35580 1976 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 ACAT1P24752 427 aaKnown RBP16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 LMO2P25791 158 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 SSTR3P32745 418 aaPredicted RBP16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 ALDH1A3P47895 512 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 EPHB3P54753 998 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 TWF1Q12792 350 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 CFAP221Q4G0U5 840 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 CBWD6Q4V339 395 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 CBWD3Q5JTY5 395 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 CBWD5Q5RIA9 395 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 GRASPQ7Z6J2 395 aaPredicted RBP16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 TRIM59Q8IWR1 403 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 ZDHHC14Q8IZN3 488 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 LEMD2Q8NC56 503 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 OR6B3Q8NGW1 331 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 ACSF2Q96CM8 615 aaPredicted RBP16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 RPGRIP1Q96KN7 1286 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 ZNF512Q96ME7 567 aaPredicted RBP16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 MED15Q96RN5 788 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 BCO2Q9BYV7 579 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 CRISPLD1Q9H336 500 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 CYP3A43Q9HB55 503 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 DNMT3BQ9UBC3 853 aaKnown RBP16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 POLIQ9UNA4 740 aa16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 ZFP37Q9Y6Q3 630 aaPredicted RBP16.07■□□□□ 0.16
CSNK1E-210ENST00000442216 TNFRSF10AO00220 468 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 CLSTN1O94985 981 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 HAPLN1P10915 354 aaPredicted RBP16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 FMO5P49326 533 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 CETN1Q12798 172 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 WDR44Q5JSH3 913 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 IQCEQ6IPM2 695 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 SASS6Q6UVJ0 657 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 C4orf50Q6ZRC1 276 aa16.06■□□□□ 0.16
CSNK1E-210ENST00000442216 UNC93AQ86WB7 457 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms