RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 PIGFQ07326 219 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 NOGQ13253 232 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 HABP2Q14520 560 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 CD300EQ496F6 205 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 COLEC12Q5KU26 742 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 FBXO42Q6P3S6 717 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 ADGRG5Q8IZF4 528 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 NSUN7Q8NE18 718 aaKnown RBP4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 HSPBAP1Q96EW2 488 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 TRIB1Q96RU8 372 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 LRFN3Q9BTN0 628 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 CDH19Q9H159 772 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 MRPL46Q9H2W6 279 aaKnown RBP4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 WDCPQ9H6R7 721 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 BRD9Q9H8M2 597 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 GNL3LQ9NVN8 582 aaKnown RBP4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 ZDHHC8Q9ULC8 765 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 CDYLQ9Y232 598 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 PCDHA3Q9Y5H8 950 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 STRCQ7RTU9 1775 aa4.25□□□□□ -1.73
HMGB3P12-201ENST00000438745 ABCA5Q8WWZ7 1642 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 E2F8A0AVK6 867 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 MGST3O14880 152 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 TSPAN6O43657 245 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 PEX1O43933 1283 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 MATN4O95460 622 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 CHEK2O96017 543 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 GJB1P08034 283 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 VCAM1P19320 739 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 TOB1P50616 345 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 HNRNPMP52272 730 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 NKX6-1P78426 367 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 NHLH1Q02575 133 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 CCDC142Q17RM4 750 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 NBPF8Q3BBV2 869 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 ATAT1Q5SQI0 421 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 PPP1R32Q7Z5V6 425 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 C14orf80Q86SX3 495 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 SLC30A5Q8TAD4 765 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 LPIN2Q92539 896 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 PGBD1Q96JS3 809 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 TIMP4Q99727 224 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 DUSP26Q9BV47 211 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 C1orf43Q9BWL3 253 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 GTPBP4Q9BZE4 634 aaKnown RBP4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 CFAP97Q9P2B7 532 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 LRIT1Q9P2V4 623 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 TLK1Q9UKI8 766 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 AGAP1Q9UPQ3 857 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 ANKRD6Q9Y2G4 727 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 CUL7Q14999 1698 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 PREX1Q8TCU6 1659 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 ABCA10Q8WWZ4 1543 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 FANCAO15360 1455 aa4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 SETD1AO15047 1707 aaKnown RBP4.24□□□□□ -1.73
HMGB3P12-201ENST00000438745 CCDC151A5D8V7 595 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 PROP1O75360 226 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 IGLV2-14P01704 120 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 TYRP14679 529 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 SMARCA1P28370 1054 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 PIK3CGP48736 1102 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 MAP2K6P52564 334 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 MC2RQ01718 297 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 MLC1Q15049 377 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 PGS1Q32NB8 556 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 TAPT1Q6NXT6 567 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 SYCE2Q6PIF2 218 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 RD3Q7Z3Z2 195 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 HEATR3Q7Z4Q2 680 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 CATIPQ7Z7H3 387 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 MYO1HQ8N1T3 1032 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 ACTRT2Q8TDY3 377 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 SNX19Q92543 992 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 HPS3Q969F9 1004 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 TMEM125Q96AQ2 219 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 FAM167AQ96KS9 214 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 OSBPL9Q96SU4 736 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 SMOQ99835 787 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 AMBRA1Q9C0C7 1298 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 PTGFRNQ9P2B2 879 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 SLC17A6Q9P2U8 582 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 TNIKQ9UKE5 1360 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 WDR7Q9Y4E6 1490 aa4.23□□□□□ -1.73
HMGB3P12-201ENST00000438745 UACAQ9BZF9 1416 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 CUX1P39880 1505 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 RUSC2Q8N2Y8 1516 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 ARAP3Q8WWN8 1544 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 KIAA0556O60303 1618 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 POLRMTO00411 1230 aaKnown RBP4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 DTNBO60941 627 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 SOAT2O75908 522 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 GNAI3P08754 354 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 ELFN1P0C7U0 828 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 RARBP10826 455 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 ATF3P18847 181 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 WT1P19544 449 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 YY1P25490 414 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 GRIA3P42263 894 aa4.22□□□□□ -1.73
HMGB3P12-201ENST00000438745 NXPH1P58417 271 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms