RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 CALML4Q96GE6 196 aa18.73■□□□□ 0.59
PTCH2-202ENST00000438067 GCNAQ96QF7 691 aa18.73■□□□□ 0.59
PTCH2-202ENST00000438067 FIZ1Q96SL8 496 aa18.73■□□□□ 0.59
PTCH2-202ENST00000438067 ZHX3Q9H4I2 956 aa18.73■□□□□ 0.59
PTCH2-202ENST00000438067 ASB7Q9H672 318 aa18.73■□□□□ 0.59
PTCH2-202ENST00000438067 BLOC1S4Q9NUP1 217 aa18.73■□□□□ 0.59
PTCH2-202ENST00000438067 HAPLN1P10915 354 aaPredicted RBP18.72■□□□□ 0.59
PTCH2-202ENST00000438067 NMT1P30419 496 aaKnown RBP18.72■□□□□ 0.59
PTCH2-202ENST00000438067 SMARCB1Q12824 385 aa18.72■□□□□ 0.59
PTCH2-202ENST00000438067 MCM6Q14566 821 aa18.72■□□□□ 0.59
PTCH2-202ENST00000438067 PTPAQ15257 358 aa18.72■□□□□ 0.59
PTCH2-202ENST00000438067 TAF12Q16514 161 aa18.72■□□□□ 0.59
PTCH2-202ENST00000438067 ERICH6BQ5W0A0 696 aa18.72■□□□□ 0.59
PTCH2-202ENST00000438067 WSCD1Q658N2 575 aa18.72■□□□□ 0.59
PTCH2-202ENST00000438067 CMTM8Q8IZV2 173 aa18.72■□□□□ 0.59
PTCH2-202ENST00000438067 C2orf15Q8WU43 125 aaKnown RBP18.72■□□□□ 0.59
PTCH2-202ENST00000438067 FAM83CQ9BQN1 747 aa18.72■□□□□ 0.59
PTCH2-202ENST00000438067 PYM1Q9BRP8 204 aaKnown RBP18.72■□□□□ 0.59
PTCH2-202ENST00000438067 DPP3Q9NY33 737 aa18.72■□□□□ 0.59
PTCH2-202ENST00000438067 C2CD2Q9Y426 696 aa18.72■□□□□ 0.59
PTCH2-202ENST00000438067 TISP43B9A030 160 aa18.71■□□□□ 0.59
PTCH2-202ENST00000438067 H3BQV1 296 aa18.71■□□□□ 0.59
PTCH2-202ENST00000438067 KRT18P05783 430 aaKnown RBP18.71■□□□□ 0.59
PTCH2-202ENST00000438067 ABCD1P33897 745 aa18.71■□□□□ 0.59
PTCH2-202ENST00000438067 TAF6P49848 677 aa18.71■□□□□ 0.59
PTCH2-202ENST00000438067 ZC2HC1CQ53FD0 456 aaPredicted RBP18.71■□□□□ 0.59
PTCH2-202ENST00000438067 ADALQ6DHV7 355 aa18.71■□□□□ 0.59
PTCH2-202ENST00000438067 PKN3Q6P5Z2 889 aa18.71■□□□□ 0.59
PTCH2-202ENST00000438067 TMEM150AQ86TG1 271 aa18.71■□□□□ 0.59
PTCH2-202ENST00000438067 SPPL2BQ8TCT7 592 aa18.71■□□□□ 0.59
PTCH2-202ENST00000438067 CCSER1Q9C0I3 900 aa18.71■□□□□ 0.59
PTCH2-202ENST00000438067 ZMYM5Q9UJ78 669 aa18.71■□□□□ 0.59
PTCH2-202ENST00000438067 STYXL1Q9Y6J8 313 aa18.71■□□□□ 0.59
PTCH2-202ENST00000438067 AXIN1O15169 862 aa18.7■□□□□ 0.58
PTCH2-202ENST00000438067 F11P03951 625 aa18.7■□□□□ 0.58
PTCH2-202ENST00000438067 HMGA1P17096 107 aaKnown RBP18.7■□□□□ 0.58
PTCH2-202ENST00000438067 PLCG1P19174 1290 aa18.7■□□□□ 0.58
PTCH2-202ENST00000438067 PXNP49023 591 aaPredicted RBP18.7■□□□□ 0.58
PTCH2-202ENST00000438067 RUNX3Q13761 415 aa18.7■□□□□ 0.58
PTCH2-202ENST00000438067 KARSQ15046 597 aaKnown RBP18.7■□□□□ 0.58
PTCH2-202ENST00000438067 TMEM196Q5HYL7 178 aa18.7■□□□□ 0.58
PTCH2-202ENST00000438067 SLFN12LQ6IEE8 588 aa18.7■□□□□ 0.58
PTCH2-202ENST00000438067 MAB21L3Q8N8X9 362 aa18.7■□□□□ 0.58
PTCH2-202ENST00000438067 RAD54LQ92698 747 aa18.7■□□□□ 0.58
PTCH2-202ENST00000438067 HPS4Q9NQG7 708 aa18.7■□□□□ 0.58
PTCH2-202ENST00000438067 ABI2Q9NYB9 513 aaPredicted RBP18.7■□□□□ 0.58
PTCH2-202ENST00000438067 AGO2Q9UKV8 859 aaKnown RBP18.7■□□□□ 0.58
PTCH2-202ENST00000438067 CCL26Q9Y258 94 aa18.7■□□□□ 0.58
PTCH2-202ENST00000438067 CCDC163A0A0D9SF12 145 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 OTOL1A6NHN0 477 aaPredicted RBP18.69■□□□□ 0.58
PTCH2-202ENST00000438067 KPNA7A9QM74 516 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 TBCAO75347 108 aaKnown RBP18.69■□□□□ 0.58
PTCH2-202ENST00000438067 GJB2P29033 226 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 AVPR1AP37288 418 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 NLRP12P59046 1061 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 POU5F1Q01860 360 aaKnown RBP18.69■□□□□ 0.58
PTCH2-202ENST00000438067 GRIN1Q05586 938 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 GRSF1Q12849 480 aaKnown RBP eCLIP18.69■□□□□ 0.58
PTCH2-202ENST00000438067 FSTL4Q6MZW2 842 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 DCP1BQ8IZD4 617 aaKnown RBP18.69■□□□□ 0.58
PTCH2-202ENST00000438067 GAB3Q8WWW8 586 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 USP13Q92995 863 aaPredicted RBP18.69■□□□□ 0.58
PTCH2-202ENST00000438067 CHFRQ96EP1 664 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 LOXL4Q96JB6 756 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 TMX3Q96JJ7 454 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 ARRDC1-AS1Q9H2J1 176 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 IKZF4Q9H2S9 585 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 ST6GALNAC4Q9H4F1 302 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 EBF3Q9H4W6 596 aa18.69■□□□□ 0.58
PTCH2-202ENST00000438067 TRDMT1O14717 391 aaKnown RBP18.68■□□□□ 0.58
PTCH2-202ENST00000438067 ATG13O75143 517 aa18.68■□□□□ 0.58
PTCH2-202ENST00000438067 RPP40O75818 363 aaKnown RBP18.68■□□□□ 0.58
PTCH2-202ENST00000438067 LONP1P36776 959 aaKnown RBP18.68■□□□□ 0.58
PTCH2-202ENST00000438067 SF3A2Q15428 464 aaKnown RBP18.68■□□□□ 0.58
PTCH2-202ENST00000438067 TRIM68Q6AZZ1 485 aa18.68■□□□□ 0.58
PTCH2-202ENST00000438067 CRELD2Q6UXH1 353 aaPredicted RBP18.68■□□□□ 0.58
PTCH2-202ENST00000438067 CACNA2D4Q7Z3S7 1137 aa18.68■□□□□ 0.58
PTCH2-202ENST00000438067 EFCAB13Q8IY85 973 aa18.68■□□□□ 0.58
PTCH2-202ENST00000438067 RASSF8Q8NHQ8 419 aa18.68■□□□□ 0.58
PTCH2-202ENST00000438067 DDX1Q92499 740 aaKnown RBP18.68■□□□□ 0.58
PTCH2-202ENST00000438067 TDP1Q9NUW8 608 aa18.68■□□□□ 0.58
PTCH2-202ENST00000438067 TMLHEQ9NVH6 421 aa18.68■□□□□ 0.58
PTCH2-202ENST00000438067 PCDHB5Q9Y5E4 795 aa18.68■□□□□ 0.58
PTCH2-202ENST00000438067 MYH11P35749 1972 aa18.68■□□□□ 0.58
PTCH2-202ENST00000438067 ZNF806P0C7X5 589 aa18.67■□□□□ 0.58
PTCH2-202ENST00000438067 ARSAP15289 507 aa18.67■□□□□ 0.58
PTCH2-202ENST00000438067 DDX6P26196 483 aaKnown RBP eCLIP18.67■□□□□ 0.58
PTCH2-202ENST00000438067 ADSSP30520 456 aa18.67■□□□□ 0.58
PTCH2-202ENST00000438067 DDIT3P35638 169 aa18.67■□□□□ 0.58
PTCH2-202ENST00000438067 RAP1GAPP47736 663 aa18.67■□□□□ 0.58
PTCH2-202ENST00000438067 LIMK1P53667 647 aa18.67■□□□□ 0.58
PTCH2-202ENST00000438067 BFSP1Q12934 665 aa18.67■□□□□ 0.58
PTCH2-202ENST00000438067 RABEP1Q15276 862 aa18.67■□□□□ 0.58
PTCH2-202ENST00000438067 CCDC6Q16204 474 aa18.67■□□□□ 0.58
PTCH2-202ENST00000438067 SV2CQ496J9 727 aa18.67■□□□□ 0.58
PTCH2-202ENST00000438067 AASDHQ4L235 1098 aaPredicted RBP18.67■□□□□ 0.58
PTCH2-202ENST00000438067 TXNDC8Q6A555 127 aa18.67■□□□□ 0.58
PTCH2-202ENST00000438067 IL31Q6EBC2 164 aa18.67■□□□□ 0.58
PTCH2-202ENST00000438067 ZNF720Q7Z2F6 126 aa18.67■□□□□ 0.58
PTCH2-202ENST00000438067 KBTBD6Q86V97 674 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms