RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 XYLBO75191 536 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 C1RP00736 705 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 ASS1P00966 412 aaKnown RBP16.6■□□□□ 0.25
TREX1-201ENST00000433541 AFPP02771 609 aaKnown RBP16.6■□□□□ 0.25
TREX1-201ENST00000433541 PRKCSHP14314 528 aaPredicted RBP16.6■□□□□ 0.25
TREX1-201ENST00000433541 IL9P15248 144 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 GNL1P36915 607 aaPredicted RBP16.6■□□□□ 0.25
TREX1-201ENST00000433541 MTHFRP42898 656 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 PSMC1P62191 440 aaKnown RBP16.6■□□□□ 0.25
TREX1-201ENST00000433541 KCNH2Q12809 1159 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 GPR17Q13304 367 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 MGAT5BQ3V5L5 792 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 TJAP1Q5JTD0 557 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 SPATA18Q8TC71 538 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 SEPT5Q99719 369 aaPredicted RBP16.6■□□□□ 0.25
TREX1-201ENST00000433541 SYT15Q9BQS2 421 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 ACBD6Q9BR61 282 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 MRPL45Q9BRJ2 306 aaKnown RBP16.6■□□□□ 0.25
TREX1-201ENST00000433541 NIF3L1Q9GZT8 377 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 ADAM7Q9H2U9 754 aa16.6■□□□□ 0.25
TREX1-201ENST00000433541 GRXCR2A6NFK2 248 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 ABLIM3O94929 683 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 TPM2P07951 284 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 CD58P19256 250 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 WARSP23381 471 aaKnown RBP16.59■□□□□ 0.25
TREX1-201ENST00000433541 SP100P23497 879 aaPredicted RBP16.59■□□□□ 0.25
TREX1-201ENST00000433541 CDH8P55286 799 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 LRMPQ12912 555 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 CBX2Q14781 532 aaPredicted RBP16.59■□□□□ 0.25
TREX1-201ENST00000433541 ANO6Q4KMQ2 910 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 INTS6LQ5JSJ4 861 aaKnown RBP16.59■□□□□ 0.25
TREX1-201ENST00000433541 OSTM1Q86WC4 334 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 SPATA2LQ8IUW3 424 aaPredicted RBP16.59■□□□□ 0.25
TREX1-201ENST00000433541 TRIM59Q8IWR1 403 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 FAM200AQ8TCP9 573 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 KBTBD7Q8WVZ9 684 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 RTP3Q9BQQ7 232 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 DNAI2Q9GZS0 605 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 ZCWPW1Q9H0M4 648 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 VRTNQ9H8Y1 702 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 CDH22Q9UJ99 828 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 CDH9Q9ULB4 789 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 SLC27A5Q9Y2P5 690 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 PCDHB5Q9Y5E4 795 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 INSL5Q9Y5Q6 135 aa16.59■□□□□ 0.25
TREX1-201ENST00000433541 UNC80Q8N2C7 3258 aa16.58■□□□□ 0.25
TREX1-201ENST00000433541 DOCK6Q96HP0 2047 aa16.58■□□□□ 0.25
TREX1-201ENST00000433541 XIRP2A4UGR9 3374 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 MTMR11A4FU01 709 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 KCNJ18B7U540 433 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 HCRTO43612 131 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 TACC1O75410 805 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 SEC24AO95486 1093 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 HNRNPA1P09651 372 aaKnown RBP eCLIP16.58■□□□□ 0.24
TREX1-201ENST00000433541 ALDH1A3P47895 512 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 MARSP56192 900 aaKnown RBP16.58■□□□□ 0.24
TREX1-201ENST00000433541 MYL5Q02045 173 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 CYP27A1Q02318 531 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 SMARCB1Q12824 385 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 DUSP4Q13115 394 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 KCNJ12Q14500 433 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 MAPRE1Q15691 268 aaKnown RBP16.58■□□□□ 0.24
TREX1-201ENST00000433541 TAF12Q16514 161 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 NFE2Q16621 373 aaPredicted RBP16.58■□□□□ 0.24
TREX1-201ENST00000433541 UVSSAQ2YD98 709 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 TCEAL8Q8IYN2 117 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 ATAD1Q8NBU5 361 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 ANKRD20A12PQ8NF67 263 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 SEMA4DQ92854 862 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 NECTIN4Q96NY8 510 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 MED15Q96RN5 788 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 PRKD2Q9BZL6 878 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 S1PR5Q9H228 398 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 GTF3C4Q9UKN8 822 aa16.58■□□□□ 0.24
TREX1-201ENST00000433541 GABRDO14764 452 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 LMO2P25791 158 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 SSTR3P32745 418 aaPredicted RBP16.57■□□□□ 0.24
TREX1-201ENST00000433541 ASPAP45381 313 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 TWF1Q12792 350 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 PLD1Q13393 1074 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 VEPH1Q14D04 833 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 NFKBIBQ15653 356 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 MDH1BQ5I0G3 518 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 IQCEQ6IPM2 695 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 C4orf50Q6ZRC1 276 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 GPR149Q86SP6 731 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 AOPEPQ8N6M6 819 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 CMASQ8NFW8 434 aaPredicted RBP16.57■□□□□ 0.24
TREX1-201ENST00000433541 ENOX1Q8TC92 643 aaKnown RBP16.57■□□□□ 0.24
TREX1-201ENST00000433541 SPPL2BQ8TCT7 592 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 C2orf15Q8WU43 125 aaKnown RBP16.57■□□□□ 0.24
TREX1-201ENST00000433541 TNIP3Q96KP6 325 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 NT5C1BQ96P26 610 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 MED10Q9BTT4 135 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 SAMSN1Q9NSI8 373 aaKnown RBP16.57■□□□□ 0.24
TREX1-201ENST00000433541 GCNT4Q9P109 453 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 MAFFQ9ULX9 164 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 YIPF1Q9Y548 306 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 C5orf42Q9H799 3197 aa16.57■□□□□ 0.24
TREX1-201ENST00000433541 ATP2C2O75185 946 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms