RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 OTOGLQ3ZCN5 2332 aa23.51■■□□□ 1.35
RPUSD3-206ENST00000433535 SLC38A8A6NNN8 435 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 PRAMEF12O95522 483 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 FGF19O95750 216 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 CCNE1P24864 410 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 PNPLA4P41247 253 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 SOX9P48436 509 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 FCHO2Q0JRZ9 810 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 BFSP1Q12934 665 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 ARHGAP15Q53QZ3 475 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 PDCL2Q8N4E4 241 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 SUMF1Q8NBK3 374 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 STKLD1Q8NE28 680 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 SPPL2BQ8TCT7 592 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 CSGALNACT1Q8TDX6 532 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 C2orf15Q8WU43 125 aaKnown RBP23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 ZFYVE19Q96K21 471 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 CHRDQ9H2X0 955 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 PDE11AQ9HCR9 933 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 TMLHEQ9NVH6 421 aa23.5■■□□□ 1.35
RPUSD3-206ENST00000433535 SPTLC2O15270 562 aa23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 CHADO15335 359 aa23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 EXTL3O43909 919 aa23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 LDHAP00338 332 aaKnown RBP23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 HAPLN1P10915 354 aaPredicted RBP23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 FOXD4L5Q5VV16 416 aaPredicted RBP23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 CCDC65Q8IXS2 484 aa23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 KIAA2013Q8IYS2 634 aa23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 TTC8Q8TAM2 541 aa23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 FOXD4L4Q8WXT5 416 aaPredicted RBP23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 MTMR12Q9C0I1 747 aa23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 SMG9Q9H0W8 520 aaKnown RBP23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 TFIP11Q9UBB9 837 aaKnown RBP23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 L1RE1Q9UN81 338 aa23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 PCDHGA2Q9Y5H1 932 aa23.49■■□□□ 1.35
RPUSD3-206ENST00000433535 GPR179Q6PRD1 2367 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 OBSL1O75147 1896 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 DPYSL4O14531 572 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 KRT19P08727 400 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 GPR15P49685 360 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 E2F4Q16254 413 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 TAF12Q16514 161 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 LMBRD2Q68DH5 695 aaPredicted RBP23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 DCP1BQ8IZD4 617 aaKnown RBP23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 GPD1LQ8N335 351 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 DCLK2Q8N568 766 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 CSGALNACT2Q8N6G5 542 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 CXorf38Q8TB03 319 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 CACTINQ8WUQ7 758 aaKnown RBP23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 GCNAQ96QF7 691 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 PI4K2AQ9BTU6 479 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 TASP1Q9H6P5 420 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 TMEM206Q9H813 350 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 LMAN1LQ9HAT1 526 aa23.48■■□□□ 1.35
RPUSD3-206ENST00000433535 ACAT1P24752 427 aaKnown RBP23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 CDC25CP30307 473 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 KPNA1P52294 538 aaPredicted RBP23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 TSPY1Q01534 308 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 SMARCB1Q12824 385 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 CCDC142Q17RM4 750 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 ZBTB44Q8NCP5 570 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 ATRIPQ8WXE1 791 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 RUBCNQ92622 972 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 DHX58Q96C10 678 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 TNMDQ9H2S6 317 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 ZSCAN32Q9NX65 697 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 DDX43Q9NXZ2 648 aaKnown RBP23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 GTSE1Q9NYZ3 720 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 SIX4Q9UIU6 781 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 ITGA11Q9UKX5 1188 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 PCDHB5Q9Y5E4 795 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 PTPRJQ12913 1337 aa23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 KIF26AQ9ULI4 1882 aaPredicted RBP23.47■■□□□ 1.35
RPUSD3-206ENST00000433535 HCRTO43612 131 aa23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 HUS1O60921 280 aa23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 TMEM191BP0C7N4 346 aa23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 ID4P47928 161 aa23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 SDHAF4Q5VUM1 108 aa23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 DENND4CQ5VZ89 1909 aa23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 OSTM1Q86WC4 334 aa23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 LRRC52Q8N7C0 313 aa23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 NELL1Q92832 810 aa23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 ZNF396Q96N95 335 aaPredicted RBP23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 TRIM9Q9C026 710 aa23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 RBM12Q9NTZ6 932 aaKnown RBP23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 KBTBD4Q9NVX7 518 aa23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 SNX9Q9Y5X1 595 aa23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 ZNF292O60281 2723 aa23.46■■□□□ 1.35
RPUSD3-206ENST00000433535 PPP6R2O75170 966 aa23.45■■□□□ 1.34
RPUSD3-206ENST00000433535 PRPF40AO75400 957 aaKnown RBP23.45■■□□□ 1.34
RPUSD3-206ENST00000433535 CHRNB1P11230 501 aa23.45■■□□□ 1.34
RPUSD3-206ENST00000433535 ASIC1P78348 528 aa23.45■■□□□ 1.34
RPUSD3-206ENST00000433535 TNK2Q07912 1038 aa23.45■■□□□ 1.34
RPUSD3-206ENST00000433535 FOXD4L6Q3SYB3 417 aaPredicted RBP23.45■■□□□ 1.34
RPUSD3-206ENST00000433535 ARHGAP29Q52LW3 1261 aa23.45■■□□□ 1.34
RPUSD3-206ENST00000433535 WDR44Q5JSH3 913 aa23.45■■□□□ 1.34
RPUSD3-206ENST00000433535 TXNDC11Q6PKC3 985 aa23.45■■□□□ 1.34
RPUSD3-206ENST00000433535 SHC4Q6S5L8 630 aa23.45■■□□□ 1.34
RPUSD3-206ENST00000433535 FOXD4L3Q6VB84 417 aaPredicted RBP23.45■■□□□ 1.34
RPUSD3-206ENST00000433535 TMEM150AQ86TG1 271 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms