RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 MMADHCQ9H3L0 296 aaPredicted RBP12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 SPECC1L-ADORA2AF8WAN1 911 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 SCNN1DP51172 638 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 GPX6P59796 221 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 GTF2IP78347 998 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 TCP10Q12799 353 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 HIF1AQ16665 826 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 CLEC16AQ2KHT3 1053 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 C1orf220Q5T0J3 134 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 MBOAT7Q96N66 472 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 NACC1Q96RE7 527 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 MECRQ9BV79 373 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 SLC7A8Q9UHI5 535 aa12.14□□□□□ -0.47
HMGCS1-202ENST00000433297 SLC26A4O43511 780 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 DLDP09622 509 aaKnown RBP12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 KLF1Q13351 362 aaPredicted RBP12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 TMED1Q13445 227 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 DDB1Q16531 1140 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 MMEL1Q495T6 779 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 CCDC174Q6PII3 467 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 TDRPQ86YL5 185 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.13□□□□□ -0.474e-14■■■□□ 16.7
HMGCS1-202ENST00000433297 SHC3Q92529 594 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 AZIN2Q96A70 460 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 NYXQ9GZU5 481 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 SEL1LQ9UBV2 794 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 SLC24A2Q9UI40 661 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 E5RJQ4 531 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 PHBP35232 272 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 SERPINB6P35237 376 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 NOVP48745 357 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 HIRAP54198 1017 aaPredicted RBP12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 ALCAMQ13740 583 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 POMGNT1Q8WZA1 660 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 ACAP3Q96P50 834 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 PHACTR1Q9C0D0 580 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 VPS11Q9H270 941 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 RABGEF1Q9UJ41 708 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 DAGLAQ9Y4D2 1042 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 RIMBP2O15034 1052 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 TCF4P15884 667 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 ADSSP30520 456 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 SREBF1P36956 1147 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 SLC18A1P54219 525 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 LMNB2Q03252 620 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 NFX1Q12986 1120 aaKnown RBP12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 PABPC1LQ4VXU2 614 aaKnown RBP12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 SPDYAQ5MJ70 313 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 SLC10A5Q5PT55 438 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 ACBD5Q5T8D3 534 aaPredicted RBP12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 PADI6Q6TGC4 694 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 RELL1Q8IUW5 271 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 EFCAB3Q8N7B9 438 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 VTI1AQ96AJ9 217 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 LXNQ9BS40 222 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 RAB20Q9NX57 234 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 STK24Q9Y6E0 443 aa12.13□□□□□ -0.47
HMGCS1-202ENST00000433297 DCAF8L1A6NGE4 600 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 ALOX15BO15296 676 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 SLC16A4O15374 487 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 LIASO43766 372 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 KRT1P04264 644 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 ADRB2P07550 413 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 GLRA2P23416 452 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 GRIA2P42262 883 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 TMPRSS15P98073 1019 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 SLC15A2Q16348 729 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 NFIL3Q16649 462 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 LMBRD2Q68DH5 695 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 MOXD1Q6UVY6 613 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 SDCCAG8Q86SQ7 713 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 NLRX1Q86UT6 975 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 SLF2Q8IX21 1173 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 FBXO36Q8NEA4 188 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 OR6Y1Q8NGX8 325 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 WDR18Q9BV38 432 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 SLC13A1Q9BZW2 595 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 CYP4F11Q9HBI6 524 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 PROSCO94903 275 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 CYP3A4P08684 503 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 SHMT1P34896 483 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 CACNB3P54284 484 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 BPIFB4P59827 614 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 IRX4P78413 519 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 SLC25A3Q00325 362 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 DBN1Q16643 649 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 GRAMD1BQ3KR37 738 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 MSS51Q4VC12 460 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 SFT2D3Q587I9 215 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 FNBP1LQ5T0N5 605 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 KRT39Q6A163 491 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 MFSD7Q6UXD7 560 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 CTAGE3PQ8IX95 158 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 ACCSQ96QU6 501 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 MIS12Q9H081 205 aa12.12□□□□□ -0.47
HMGCS1-202ENST00000433297 DDX43Q9NXZ2 648 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms