RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 TTC23Q5W5X9 447 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 ARMCX6Q7L4S7 300 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 RSPH1Q8WYR4 309 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 INTS10Q9NVR2 710 aaKnown RBP13.92□□□□□ -0.18
CDK12-201ENST00000430627 CAPN7Q9Y6W3 813 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 E2F8A0AVK6 867 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 COPEO14579 308 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 SLC2A3P11169 496 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 HOXC12P31275 282 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 ORC1Q13415 861 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 AASDHQ4L235 1098 aaPredicted RBP13.92□□□□□ -0.18
CDK12-201ENST00000430627 PDXDC1Q6P996 788 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 ATL2Q8NHH9 583 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 RNASE11Q8TAA1 199 aaKnown RBP13.92□□□□□ -0.18
CDK12-201ENST00000430627 USP13Q92995 863 aaPredicted RBP13.92□□□□□ -0.18
CDK12-201ENST00000430627 USP28Q96RU2 1077 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 NEDD4P46934 1319 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 C2orf81A6NN90 581 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 EFTUD2Q15029 972 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDK12-201ENST00000430627 GRIK4Q16099 956 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 FAXCQ5TGI0 409 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 CCDC60Q8IWA6 550 aaPredicted RBP13.92□□□□□ -0.18
CDK12-201ENST00000430627 PTPRN2Q92932 1015 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 PRMT6Q96LA8 375 aaPredicted RBP13.92□□□□□ -0.18
CDK12-201ENST00000430627 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDK12-201ENST00000430627 TRIM55Q9BYV6 548 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 SH3GLB2Q9NR46 395 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 MRPL42Q9Y6G3 142 aaKnown RBP13.92□□□□□ -0.18
CDK12-201ENST00000430627 TBC1D3DA0A087WVF3 549 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 TBC1D3IA0A087WXS9 549 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 TBC1D3EA0A087X179 549 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 TBC1D3KA0A087X1G2 549 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 TBC1D3FA6NER0 549 aaPredicted RBP13.92□□□□□ -0.18
CDK12-201ENST00000430627 TBC1D3LB9A6J9 549 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 CCL16O15467 120 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 HS6ST1O60243 411 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 TBC1D3HP0C7X1 549 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 PTPN3P26045 913 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 MORF4L2Q15014 288 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 PTPN21Q16825 1174 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 SEZ6Q53EL9 994 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 TBC1D3GQ6DHY5 549 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 TBC1D3CQ6IPX1 549 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 CATSPER3Q86XQ3 398 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 TBC1D3Q8IZP1 549 aaPredicted RBP13.92□□□□□ -0.18
CDK12-201ENST00000430627 KRT222Q8N1A0 295 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 SUN3Q8TAQ9 357 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 BTBD9Q96Q07 612 aa13.92□□□□□ -0.18
CDK12-201ENST00000430627 TECPR2O15040 1411 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 F8W810 466 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 ACRP10323 421 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 INPP5BP32019 993 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 PABPC1LQ4VXU2 614 aaKnown RBP13.91□□□□□ -0.18
CDK12-201ENST00000430627 NT5DC3Q86UY8 548 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 CCDC90BQ9GZT6 254 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.91□□□□□ -0.18
CDK12-201ENST00000430627 TRIM16O95361 564 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 ALPPL2P10696 532 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 RAB27AP51159 221 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 TBL3Q12788 808 aaKnown RBP13.91□□□□□ -0.18
CDK12-201ENST00000430627 ALS2CLQ60I27 953 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 HHIPL2Q6UWX4 724 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 CPA6Q8N4T0 437 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 TTC13Q8NBP0 860 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 ICA1LQ8NDH6 482 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 HIPK4Q8NE63 616 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 PRKAB1Q9Y478 270 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 ATP7BP35670 1465 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 GSAPA4D1B5 854 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 LVRNQ6Q4G3 990 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 PPM1NQ8N819 430 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 ADAM2Q99965 735 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 AP1M1Q9BXS5 423 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 ATP8A1Q9Y2Q0 1164 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 NCF1BA6NI72 391 aaPredicted RBP13.91□□□□□ -0.18
CDK12-201ENST00000430627 NCF1CA8MVU1 366 aaPredicted RBP13.91□□□□□ -0.18
CDK12-201ENST00000430627 WEE2P0C1S8 567 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 NCF1P14598 390 aaPredicted RBP13.91□□□□□ -0.18
CDK12-201ENST00000430627 LBX1P52954 281 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 NCOA4Q13772 614 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 STAT4Q14765 748 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 CARTPTQ16568 116 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 BTN2A1Q7KYR7 527 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 ZNF589Q86UQ0 364 aaPredicted RBP13.91□□□□□ -0.18
CDK12-201ENST00000430627 TEX9Q8N6V9 391 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 COG1Q8WTW3 980 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 KAT2BQ92831 832 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 EML4Q9HC35 981 aaKnown RBP13.91□□□□□ -0.18
CDK12-201ENST00000430627 PJA2O43164 708 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 TDP2O95551 362 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 MYBL2P10244 700 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 PDGFRAP16234 1089 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 KLRC1P26715 233 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 ACADSBP45954 432 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 SHROOM1Q2M3G4 852 aaPredicted RBP13.91□□□□□ -0.18
CDK12-201ENST00000430627 SPATA1Q5VX52 437 aa13.91□□□□□ -0.18
CDK12-201ENST00000430627 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.91□□□□□ -0.18
CDK12-201ENST00000430627 STAU1O95793 577 aaKnown RBP13.9□□□□□ -0.18
CDK12-201ENST00000430627 NDUFA8P51970 172 aa13.9□□□□□ -0.18
CDK12-201ENST00000430627 KDSRQ06136 332 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms