RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 KPNA5O15131 536 aa17.13■□□□□ 0.33
RIF1-204ENST00000430328 SSNA1O43805 119 aa17.13■□□□□ 0.33
RIF1-204ENST00000430328 BTDP43251 543 aa17.13■□□□□ 0.33
RIF1-204ENST00000430328 GMFBP60983 142 aa17.13■□□□□ 0.33
RIF1-204ENST00000430328 ST8SIA6P61647 398 aa17.13■□□□□ 0.33
RIF1-204ENST00000430328 IDI1Q13907 227 aa17.13■□□□□ 0.33
RIF1-204ENST00000430328 RC3H1Q5TC82 1133 aaKnown RBP17.13■□□□□ 0.33
RIF1-204ENST00000430328 TMEM138Q9NPI0 162 aa17.13■□□□□ 0.33
RIF1-204ENST00000430328 NOS1P29475 1434 aa17.13■□□□□ 0.33
RIF1-204ENST00000430328 POLBP06746 335 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 GPC1P35052 558 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 AP3B2Q13367 1082 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 OOSP2Q86WS3 158 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 SLC44A2Q8IWA5 706 aaPredicted RBP17.12■□□□□ 0.33
RIF1-204ENST00000430328 RCOR2Q8IZ40 523 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 RORBQ92753 470 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 C1orf50Q9BV19 199 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 CHID1Q9BWS9 393 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 UBE2QL1A1L167 161 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 SMNDC1O75940 238 aaKnown RBP eCLIP17.12■□□□□ 0.331e-7■□□□□ 8.5
RIF1-204ENST00000430328 PHKA2P46019 1235 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 IL5RAQ01344 420 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 BTBD8Q5XKL5 378 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 ARMC7Q9H6L4 198 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 LOC100653049A0A140TA62 436 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 CCDC182A6NF36 153 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 SCP2P22307 547 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 EFR3AQ14156 821 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 FAM83EQ2M2I3 478 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 MCPH1Q8NEM0 835 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 RBM15Q96T37 977 aaKnown RBP eCLIP17.12■□□□□ 0.336e-8■■□□□ 12
RIF1-204ENST00000430328 GDAQ9Y2T3 454 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 KAT6AQ92794 2004 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 TPD52L2O43399 206 aaKnown RBP17.12■□□□□ 0.33
RIF1-204ENST00000430328 SNX4O95219 450 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 MSH3P20585 1137 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 LRPAP1P30533 357 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 SCUBE1Q8IWY4 988 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 LINC00301Q8NCQ3 95 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 PJA1Q8NG27 643 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 ILKAPQ9H0C8 392 aaPredicted RBP17.12■□□□□ 0.33
RIF1-204ENST00000430328 ZHX2Q9Y6X8 837 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 VAMP7P51809 220 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 PTK6Q13882 451 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 UNC13DQ70J99 1090 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 ZNF614Q8N883 585 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 A0A087X0T9 212 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 MOCS2O96007 188 aaPredicted RBP17.12■□□□□ 0.33
RIF1-204ENST00000430328 NR3C1P04150 777 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 GCLMP48507 274 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 SCNN1DP51172 638 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 SCARA3Q6AZY7 606 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 RASSF6Q6ZTQ3 369 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 MMGT1Q8N4V1 131 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 SYCP2Q9BX26 1530 aa17.12■□□□□ 0.33
RIF1-204ENST00000430328 A0A087WWV3 80 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 AREL1O15033 823 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 FAM20BO75063 409 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 SNRPAP09012 282 aaKnown RBP17.11■□□□□ 0.33
RIF1-204ENST00000430328 PTPN7P35236 360 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 CHI3L2Q15782 390 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 ZCCHC8Q6NZY4 707 aaKnown RBP17.11■□□□□ 0.33
RIF1-204ENST00000430328 TRAPPC9Q96Q05 1148 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 ING4Q9UNL4 249 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 NEU2Q9Y3R4 380 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 A0A0X1KG70 313 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 MZF1P28698 734 aaPredicted RBP17.11■□□□□ 0.33
RIF1-204ENST00000430328 ZNF671Q8TAW3 534 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 FAM210AQ96ND0 272 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 SERPINB12Q96P63 405 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 CD248Q9HCU0 757 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 PHF11Q9UIL8 331 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 JAK3P52333 1124 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 CAMK1Q14012 370 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 PROSER1Q86XN7 944 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 ATPAF2Q8N5M1 289 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 ADGRF5Q8IZF2 1346 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 WWP2O00308 870 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 KPNA6O60684 536 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 RFX3P48380 749 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 RPS8P62241 208 aaKnown RBP17.11■□□□□ 0.33
RIF1-204ENST00000430328 VPS33BQ9H267 617 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 SIK3Q9Y2K2 1263 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 EXOSC10Q01780 885 aaKnown RBP17.11■□□□□ 0.33
RIF1-204ENST00000430328 G2E3Q7L622 706 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 KIAA0825Q8IV33 1275 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 C4orf33Q8N1A6 199 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 FAR2Q96K12 515 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 ITIH2P19823 946 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 CYB5D1Q6P9G0 228 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 THNSL1Q8IYQ7 743 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 RFFLQ8WZ73 363 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 E2F7Q96AV8 911 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 APOL5Q9BWW9 433 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 CNPP09543 421 aaKnown RBP17.11■□□□□ 0.33
RIF1-204ENST00000430328 THRAP10827 490 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 CYP2C19P33261 490 aa17.11■□□□□ 0.33
RIF1-204ENST00000430328 ABCC4O15439 1325 aa17.1■□□□□ 0.33
RIF1-204ENST00000430328 FAM49AQ9H0Q0 323 aaPredicted RBP17.1■□□□□ 0.33
RIF1-204ENST00000430328 POLR3AO14802 1390 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms