RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 CENPCQ03188 943 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 ZNF513Q8N8E2 541 aaPredicted RBP18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 MTIF3Q9H2K0 278 aaKnown RBP18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 VIPAS39Q9H9C1 493 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 PPCSQ9HAB8 311 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 SPAG6O75602 509 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 KCNK10P57789 538 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 TRIM60Q495X7 471 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 PRPF39Q86UA1 669 aaKnown RBP18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 SEC16BQ96JE7 1060 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 MTO1Q9Y2Z2 717 aaKnown RBP18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 A0A1W2PQJ5 194 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 EIF3HO15372 352 aaKnown RBP eCLIP18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 ITGB3P05106 788 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 MZF1P28698 734 aaPredicted RBP18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 ALDH1A3P47895 512 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 PLEKHM3Q6ZWE6 761 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 GOLPH3Q9H4A6 298 aa18.72■□□□□ 0.59
ARHGEF28-203ENST00000426542 TMEM120BA0PK00 339 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 SLC25A27O95847 323 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 PTK6Q13882 451 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 CHI3L2Q15782 390 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 KYNUQ16719 465 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 WNK4Q96J92 1243 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 LZTS1Q9Y250 596 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 ZNF711Q9Y462 761 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 LRRC7Q96NW7 1537 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 HBP1O60381 514 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 CSE1LP55060 971 aaKnown RBP18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 SNRPFP62306 86 aaKnown RBP18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 NOTUMQ6P988 496 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 RAD9BQ6WBX8 426 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 ZNF677Q86XU0 584 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 PDLIM2Q96JY6 352 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 SLC39A10Q9ULF5 831 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 GRID1Q9ULK0 1009 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 V9GYQ6 96 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 KLHDC7AQ5VTJ3 777 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 BRD8Q9H0E9 1235 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 MANSC1Q9H8J5 431 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 CNTNAP5Q8WYK1 1306 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 KCNJ1P48048 391 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 SF3B3Q15393 1217 aaKnown RBP18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 MROH9Q5TGP6 573 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 POTEAQ6S8J7 498 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 LAYNQ6UX15 382 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 CINPQ9BW66 212 aaPredicted RBP18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 EPB41L4AQ9HCS5 686 aaPredicted RBP18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 GID8Q9NWU2 228 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 ALG6Q9Y672 507 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 IMPDH2P12268 514 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 PTGER2P43116 358 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 PPIL6Q8IXY8 311 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 TFB1MQ8WVM0 346 aaKnown RBP18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 FAM151AQ8WW52 585 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 SENP2Q9HC62 589 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 KCNH7Q9NS40 1196 aa18.71■□□□□ 0.59
ARHGEF28-203ENST00000426542 USP42Q9H9J4 1324 aaKnown RBP18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 DEAF1O75398 565 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 FAM200BP0CF97 657 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 TMEM39BQ9GZU3 492 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 CFAP99D6REC4 459 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 MTFR1Q15390 333 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 GPRC5AQ8NFJ5 357 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 ZNF669Q96BR6 464 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 HES6Q96HZ4 224 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 RIT2Q99578 217 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 S100A5P33763 92 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 MRPS15P82914 257 aaKnown RBP18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 CENPPQ6IPU0 288 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 C11orf74Q86VG3 221 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 TC2NQ8N9U0 490 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 RIC8BQ9NVN3 520 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 HPCAP84074 193 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 SKOR1P84550 965 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 DDX42Q86XP3 938 aaKnown RBP eCLIP18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 ZNF34Q8IZ26 560 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 C6orf203Q9P0P8 240 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 DTNAQ9Y4J8 743 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 B2RBV5 119 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 TCF7P36402 384 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 AMHR2Q16671 573 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 NAPEPLDQ6IQ20 393 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 USP49Q70CQ1 688 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 ZFP42Q96MM3 310 aa18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 ROPN1BQ9BZX4 212 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 ROPN1Q9HAT0 212 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 ABI2Q9NYB9 513 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF28-203ENST00000426542 ALKQ9UM73 1620 aa18.69■□□□□ 0.58
ARHGEF28-203ENST00000426542 FAM107AO95990 144 aa18.69■□□□□ 0.58
ARHGEF28-203ENST00000426542 RPA1P27694 616 aa18.69■□□□□ 0.58
ARHGEF28-203ENST00000426542 CENPAP49450 140 aa18.69■□□□□ 0.58
ARHGEF28-203ENST00000426542 FXR2P51116 673 aaKnown RBP eCLIP18.69■□□□□ 0.581e-6■□□□□ 10.1
ARHGEF28-203ENST00000426542 TDRD10Q5VZ19 366 aaKnown RBP18.69■□□□□ 0.58
ARHGEF28-203ENST00000426542 SDE2Q6IQ49 451 aa18.69■□□□□ 0.58
ARHGEF28-203ENST00000426542 LINC00116Q8NCU8 138 aa18.69■□□□□ 0.58
ARHGEF28-203ENST00000426542 CHST13Q8NET6 341 aa18.69■□□□□ 0.58
ARHGEF28-203ENST00000426542 RIN2Q8WYP3 895 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms