RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 FAM212AQ96EL1 285 aa16.21■□□□□ 0.19
ATG4B-209ENST00000425239 GMEB2Q9UKD1 530 aa16.21■□□□□ 0.19
ATG4B-209ENST00000425239 USP18Q9UMW8 372 aa16.21■□□□□ 0.19
ATG4B-209ENST00000425239 CFAP47Q6ZTR5 3102 aa16.21■□□□□ 0.19
ATG4B-209ENST00000425239 ACACBO00763 2458 aa16.21■□□□□ 0.18
ATG4B-209ENST00000425239 CYB561D2O14569 222 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 FAM13AO94988 1023 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 HAPLN1P10915 354 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-209ENST00000425239 SIM2Q14190 667 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-209ENST00000425239 RABEP1Q15276 862 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 CSRP2Q16527 193 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 WSCD1Q658N2 575 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 PKN3Q6P5Z2 889 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 USP49Q70CQ1 688 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 SYNPOQ8N3V7 929 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 ZSWIM2Q8NEG5 633 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 BPIFB1Q8TDL5 484 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 CALML4Q96GE6 196 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 SMG9Q9H0W8 520 aaKnown RBP16.2■□□□□ 0.18
ATG4B-209ENST00000425239 HPS4Q9NQG7 708 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 SEMA4GQ9NTN9 838 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 TMLHEQ9NVH6 421 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 DPP3Q9NY33 737 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 CDV3Q9UKY7 258 aaKnown RBP16.2■□□□□ 0.18
ATG4B-209ENST00000425239 CCL26Q9Y258 94 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 OBSL1O75147 1896 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 WDFY3Q8IZQ1 3526 aa16.2■□□□□ 0.18
ATG4B-209ENST00000425239 SLC30A4O14863 429 aa16.19■□□□□ 0.18
ATG4B-209ENST00000425239 GDF9O60383 454 aa16.19■□□□□ 0.18
ATG4B-209ENST00000425239 LONP1P36776 959 aaKnown RBP16.19■□□□□ 0.18
ATG4B-209ENST00000425239 KCNA1Q09470 495 aa16.19■□□□□ 0.18
ATG4B-209ENST00000425239 ADALQ6DHV7 355 aa16.19■□□□□ 0.18
ATG4B-209ENST00000425239 PRR23BQ6ZRT6 265 aa16.19■□□□□ 0.18
ATG4B-209ENST00000425239 CMTM8Q8IZV2 173 aa16.19■□□□□ 0.18
ATG4B-209ENST00000425239 GIPC2Q8TF65 315 aa16.19■□□□□ 0.18
ATG4B-209ENST00000425239 C2orf15Q8WU43 125 aaKnown RBP16.19■□□□□ 0.18
ATG4B-209ENST00000425239 LARP4BQ92615 738 aaKnown RBP16.19■□□□□ 0.18
ATG4B-209ENST00000425239 FBRSL1Q9HCM7 1045 aaKnown RBP16.19■□□□□ 0.18
ATG4B-209ENST00000425239 GKN1Q9NS71 199 aa16.19■□□□□ 0.18
ATG4B-209ENST00000425239 AGO2Q9UKV8 859 aaKnown RBP16.19■□□□□ 0.18
ATG4B-209ENST00000425239 DSEQ9UL01 958 aa16.19■□□□□ 0.18
ATG4B-209ENST00000425239 RALGAPA1Q6GYQ0 2036 aa16.19■□□□□ 0.18
ATG4B-209ENST00000425239 KPNA7A9QM74 516 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 EXTL3O43909 919 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 ADRB1P08588 477 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 CDC25CP30307 473 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 TAF6P49848 677 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 NLRP12P59046 1061 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 PLCB2Q00722 1185 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 SMARCB1Q12824 385 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 ITPRIPL2Q3MIP1 535 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 MGAT5BQ3V5L5 792 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 ARHGAP15Q53QZ3 475 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 TMEM196Q5HYL7 178 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 SLFN12LQ6IEE8 588 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 PRR23CQ6ZRP0 262 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 WDR5BQ86VZ2 330 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 FAM160A2Q8N612 972 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-209ENST00000425239 SPPL2BQ8TCT7 592 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 USP13Q92995 863 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-209ENST00000425239 DNAJC19Q96DA6 116 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 EPSTI1Q96J88 318 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 PKMYT1Q99640 499 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 SEPT5Q99719 369 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-209ENST00000425239 PYM1Q9BRP8 204 aaKnown RBP16.18■□□□□ 0.18
ATG4B-209ENST00000425239 RAB23Q9ULC3 237 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 CACNA1BQ00975 2339 aa16.18■□□□□ 0.18
ATG4B-209ENST00000425239 TCHHQ07283 1943 aa16.17■□□□□ 0.18
ATG4B-209ENST00000425239 EML5Q05BV3 1969 aa16.17■□□□□ 0.18
ATG4B-209ENST00000425239 H3BQV1 296 aa16.17■□□□□ 0.18
ATG4B-209ENST00000425239 DPYSL4O14531 572 aa16.17■□□□□ 0.18
ATG4B-209ENST00000425239 TRDMT1O14717 391 aaKnown RBP16.17■□□□□ 0.18
ATG4B-209ENST00000425239 TM4SF5O14894 197 aa16.17■□□□□ 0.18
ATG4B-209ENST00000425239 ABCD1P33897 745 aa16.17■□□□□ 0.18
ATG4B-209ENST00000425239 GPR15P49685 360 aa16.17■□□□□ 0.18
ATG4B-209ENST00000425239 PTPAQ15257 358 aa16.17■□□□□ 0.18
ATG4B-209ENST00000425239 SF3A1Q15459 793 aaKnown RBP16.17■□□□□ 0.18
ATG4B-209ENST00000425239 HEATR6Q6AI08 1181 aaKnown RBP16.17■□□□□ 0.18
ATG4B-209ENST00000425239 FSTL4Q6MZW2 842 aa16.17■□□□□ 0.18
ATG4B-209ENST00000425239 NETO1Q8TDF5 533 aa16.17■□□□□ 0.18
ATG4B-209ENST00000425239 SDK1Q7Z5N4 2213 aa16.17■□□□□ 0.18
ATG4B-209ENST00000425239 ATG2BQ96BY7 2078 aa16.16■□□□□ 0.18
ATG4B-209ENST00000425239 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-209ENST00000425239 SOBPA7XYQ1 873 aa16.16■□□□□ 0.18
ATG4B-209ENST00000425239 TADA3O75528 432 aa16.16■□□□□ 0.18
ATG4B-209ENST00000425239 RAP1GAPP47736 663 aa16.16■□□□□ 0.18
ATG4B-209ENST00000425239 MCM2P49736 904 aa16.16■□□□□ 0.18
ATG4B-209ENST00000425239 RUNX3Q13761 415 aa16.16■□□□□ 0.18
ATG4B-209ENST00000425239 LARP1BQ659C4 914 aaKnown RBP16.16■□□□□ 0.18
ATG4B-209ENST00000425239 TRIM68Q6AZZ1 485 aa16.16■□□□□ 0.18
ATG4B-209ENST00000425239 NT5DC4Q86YG4 428 aa16.16■□□□□ 0.18
ATG4B-209ENST00000425239 THEM5Q8N1Q8 247 aa16.16■□□□□ 0.18
ATG4B-209ENST00000425239 STKLD1Q8NE28 680 aa16.16■□□□□ 0.18
ATG4B-209ENST00000425239 EZH1Q92800 747 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-209ENST00000425239 ZHX3Q9H4I2 956 aa16.16■□□□□ 0.18
ATG4B-209ENST00000425239 ZMYM5Q9UJ78 669 aa16.16■□□□□ 0.18
ATG4B-209ENST00000425239 CHD8Q9HCK8 2581 aa16.16■□□□□ 0.18
ATG4B-209ENST00000425239 CCDC163A0A0D9SF12 145 aa16.15■□□□□ 0.18
ATG4B-209ENST00000425239 KRT37O76014 449 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms