RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ACTN2P35609 894 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 GNGT1P63211 74 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 ENPEPQ07075 957 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 ANKRD23Q86SG2 305 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 SESTD1Q86VW0 696 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 HEXIM2Q96MH2 286 aaKnown RBP9.32□□□□□ -0.92
SNCA-206ENST00000420646 DDX23Q9BUQ8 820 aaKnown RBP9.32□□□□□ -0.92
SNCA-206ENST00000420646 NXF3Q9H4D5 531 aaKnown RBP9.32□□□□□ -0.92
SNCA-206ENST00000420646 GOLGA2P5Q9HBQ8 144 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 FAM114A2Q9NRY5 505 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 MORF4L1Q9UBU8 362 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 TUBGCP4Q9UGJ1 667 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 PCYOX1Q9UHG3 505 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 SIP14410 1827 aa9.32□□□□□ -0.92
SNCA-206ENST00000420646 GOLGA8KD6RF30 607 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 ASAP2O43150 1006 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 TREHO43280 583 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 ERBB2P04626 1255 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 CHKAP35790 457 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 GCLCP48506 637 aaPredicted RBP9.31□□□□□ -0.92
SNCA-206ENST00000420646 RGS7P49802 495 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 IRAK1P51617 712 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 ZNF157P51786 506 aaPredicted RBP9.31□□□□□ -0.92
SNCA-206ENST00000420646 NRLP54845 237 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 DGKDQ16760 1214 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 ARFGAP1Q8N6T3 406 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 TMEM35BQ8NCS4 154 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.31□□□□□ -0.92
SNCA-206ENST00000420646 KAT2BQ92831 832 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 FAM81BQ96LP2 452 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 ACAP3Q96P50 834 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 ZIC5Q96T25 663 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 OSBPL8Q9BZF1 889 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 RNF39Q9H2S5 420 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 SYNCQ9H7C4 482 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 MRPL47Q9HD33 250 aaKnown RBP9.31□□□□□ -0.92
SNCA-206ENST00000420646 DPP3Q9NY33 737 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 A0A1B0GUA9 196 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 MAGEB2O15479 319 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 ECEL1O95672 775 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 CD48P09326 243 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 SMIM10L2AP0DMW4 78 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 SMIM10L2BP0DMW5 78 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 MYBL1P10243 752 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 CYP3A5P20815 502 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 IL1R2P27930 398 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 NDST1P52848 882 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 SEC24CP53992 1094 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 PSMC1P62191 440 aaKnown RBP9.31□□□□□ -0.92
SNCA-206ENST00000420646 C1QBPQ07021 282 aaKnown RBP9.31□□□□□ -0.92
SNCA-206ENST00000420646 DHX34Q14147 1143 aaKnown RBP9.31□□□□□ -0.92
SNCA-206ENST00000420646 TMEM132DQ14C87 1099 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 CCDC142Q17RM4 750 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 FAM110CQ1W6H9 321 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 KRT71Q3SY84 523 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 RHOT1Q8IXI2 618 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 LRRN4Q8WUT4 740 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 LRRC45Q96CN5 670 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 PARK7Q99497 189 aaKnown RBP9.31□□□□□ -0.92
SNCA-206ENST00000420646 CAPS2Q9BXY5 557 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 FAM107BQ9H098 131 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 FAM49BQ9NUQ9 324 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 NOVA2Q9UNW9 492 aaKnown RBP9.31□□□□□ -0.92
SNCA-206ENST00000420646 PLXNA1Q9UIW2 1896 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 TCRBV5S1A1TA0A578 114 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 RBM47A0AV96 593 aaKnown RBP9.31□□□□□ -0.92
SNCA-206ENST00000420646 M0QYV0 167 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 CAND2O75155 1236 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 ACSL3O95573 720 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 MYZAPP0CAP1 466 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 AP3M2P53677 418 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 IFFO1Q0D2I5 559 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 ODF2Q5BJF6 829 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 TRIM72Q6ZMU5 477 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 CATSPER4Q7RTX7 472 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 EXOC8Q8IYI6 725 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 MDM1Q8TC05 714 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 ATP6V1G3Q96LB4 118 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 METTL5Q9NRN9 209 aaKnown RBP9.31□□□□□ -0.92
SNCA-206ENST00000420646 RSPH14Q9UHP6 348 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 NME7Q9Y5B8 376 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 SNX9Q9Y5X1 595 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 TRIP11Q15643 1979 aa9.31□□□□□ -0.92
SNCA-206ENST00000420646 KAT6AQ92794 2004 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 LRRD1A4D1F6 860 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 MICAL2O94851 1124 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 KRT3P12035 628 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 NR1D1P20393 614 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 PMS2P54278 862 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 PTPN11Q06124 597 aaPredicted RBP9.3□□□□□ -0.92
SNCA-206ENST00000420646 NFX1Q12986 1120 aaKnown RBP9.3□□□□□ -0.92
SNCA-206ENST00000420646 KLF1Q13351 362 aaPredicted RBP9.3□□□□□ -0.92
SNCA-206ENST00000420646 TAF1CQ15572 869 aaPredicted RBP9.3□□□□□ -0.92
SNCA-206ENST00000420646 CDO1Q16878 200 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 CCDC38Q502W7 563 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 ZNF618Q5T7W0 954 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 LEKR1Q6ZMV7 388 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 ACOT1Q86TX2 421 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 TLK2Q86UE8 772 aa9.3□□□□□ -0.92
SNCA-206ENST00000420646 TRIM11Q96F44 468 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms