RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 MYL7Q01449 175 aa21.8■■□□□ 1.08
GTF3A-202ENST00000419181 ZCWPW2Q504Y3 356 aa21.8■■□□□ 1.08
GTF3A-202ENST00000419181 CYP4A22Q5TCH4 519 aa21.8■■□□□ 1.08
GTF3A-202ENST00000419181 POTEHQ6S545 545 aa21.8■■□□□ 1.08
GTF3A-202ENST00000419181 PARM1Q6UWI2 310 aa21.8■■□□□ 1.08
GTF3A-202ENST00000419181 MTSS1LQ765P7 747 aa21.8■■□□□ 1.08
GTF3A-202ENST00000419181 SUGP1Q8IWZ8 645 aaKnown RBP21.8■■□□□ 1.08
GTF3A-202ENST00000419181 SMYD4Q8IYR2 804 aaPredicted RBP21.8■■□□□ 1.08
GTF3A-202ENST00000419181 SPPL2BQ8TCT7 592 aa21.8■■□□□ 1.08
GTF3A-202ENST00000419181 KBTBD7Q8WVZ9 684 aa21.8■■□□□ 1.08
GTF3A-202ENST00000419181 LRRC3Q9BY71 257 aa21.8■■□□□ 1.08
GTF3A-202ENST00000419181 ASAH2Q9NR71 780 aa21.8■■□□□ 1.08
GTF3A-202ENST00000419181 TMLHEQ9NVH6 421 aa21.8■■□□□ 1.08
GTF3A-202ENST00000419181 FRMD4BQ9Y2L6 1034 aa21.8■■□□□ 1.08
GTF3A-202ENST00000419181 MAPK13O15264 365 aa21.79■■□□□ 1.08
GTF3A-202ENST00000419181 NARSO43776 548 aaKnown RBP21.79■■□□□ 1.08
GTF3A-202ENST00000419181 STAU1O95793 577 aaKnown RBP21.79■■□□□ 1.08
GTF3A-202ENST00000419181 NR2F2P24468 414 aa21.79■■□□□ 1.08
GTF3A-202ENST00000419181 ACAT1P24752 427 aaKnown RBP21.79■■□□□ 1.08
GTF3A-202ENST00000419181 CDR1P51861 262 aa21.79■■□□□ 1.08
GTF3A-202ENST00000419181 INTS6LQ5JSJ4 861 aaKnown RBP21.79■■□□□ 1.08
GTF3A-202ENST00000419181 TDRD10Q5VZ19 366 aaKnown RBP21.79■■□□□ 1.08
GTF3A-202ENST00000419181 CEP135Q66GS9 1140 aa21.79■■□□□ 1.08
GTF3A-202ENST00000419181 TMC8Q8IU68 726 aa21.79■■□□□ 1.08
GTF3A-202ENST00000419181 ELOA2Q8IYF1 753 aaPredicted RBP21.79■■□□□ 1.08
GTF3A-202ENST00000419181 FBXL6Q8N531 539 aa21.79■■□□□ 1.08
GTF3A-202ENST00000419181 ST13P5Q8NFI4 369 aaPredicted RBP21.79■■□□□ 1.08
GTF3A-202ENST00000419181 TMC2Q8TDI7 906 aa21.79■■□□□ 1.08
GTF3A-202ENST00000419181 PSMG2Q969U7 264 aa21.79■■□□□ 1.08
GTF3A-202ENST00000419181 PKMYT1Q99640 499 aa21.79■■□□□ 1.08
GTF3A-202ENST00000419181 SEPT5Q99719 369 aaPredicted RBP21.79■■□□□ 1.08
GTF3A-202ENST00000419181 XYLT2Q9H1B5 865 aa21.79■■□□□ 1.08
GTF3A-202ENST00000419181 ABI2Q9NYB9 513 aaPredicted RBP21.79■■□□□ 1.08
GTF3A-202ENST00000419181 CHMP5Q9NZZ3 219 aa21.79■■□□□ 1.08
GTF3A-202ENST00000419181 ASB3Q9Y575 518 aa21.79■■□□□ 1.08
GTF3A-202ENST00000419181 PCDHA5Q9Y5H7 936 aa21.79■■□□□ 1.08
GTF3A-202ENST00000419181 MUC6Q6W4X9 2439 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 KMT2EQ8IZD2 1858 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 HCRTO43612 131 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 GADD45BO75293 160 aaPredicted RBP21.78■■□□□ 1.08
GTF3A-202ENST00000419181 MOSPD3O75425 235 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 SMC2O95347 1197 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 PDGFBP01127 241 aaPredicted RBP21.78■■□□□ 1.08
GTF3A-202ENST00000419181 HAPLN1P10915 354 aaPredicted RBP21.78■■□□□ 1.08
GTF3A-202ENST00000419181 SRFP11831 508 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 ATF6P18850 670 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 PCSK1P29120 753 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 MYL6P60660 151 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 DLG4P78352 724 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 TRPC3Q13507 836 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 NFE2Q16621 373 aaPredicted RBP21.78■■□□□ 1.08
GTF3A-202ENST00000419181 MGAT5BQ3V5L5 792 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 ZNF658Q5TYW1 1059 aaPredicted RBP21.78■■□□□ 1.08
GTF3A-202ENST00000419181 ERCC4Q92889 916 aaPredicted RBP21.78■■□□□ 1.08
GTF3A-202ENST00000419181 MCRS1Q96EZ8 462 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 RPP25Q9BUL9 199 aaKnown RBP21.78■■□□□ 1.08
GTF3A-202ENST00000419181 HOOK1Q9UJC3 728 aaKnown RBP21.78■■□□□ 1.08
GTF3A-202ENST00000419181 PCDHB5Q9Y5E4 795 aa21.78■■□□□ 1.08
GTF3A-202ENST00000419181 PHACTR2O75167 634 aa21.77■■□□□ 1.08
GTF3A-202ENST00000419181 AKAP3O75969 853 aa21.77■■□□□ 1.08
GTF3A-202ENST00000419181 C4BPAP04003 597 aaKnown RBP21.77■■□□□ 1.08
GTF3A-202ENST00000419181 MYL4P12829 197 aa21.77■■□□□ 1.08
GTF3A-202ENST00000419181 WARSP23381 471 aaKnown RBP21.77■■□□□ 1.08
GTF3A-202ENST00000419181 RPL13P26373 211 aaKnown RBP21.77■■□□□ 1.08
GTF3A-202ENST00000419181 ATICP31939 592 aa21.77■■□□□ 1.08
GTF3A-202ENST00000419181 ANP32AP39687 249 aaKnown RBP21.77■■□□□ 1.08
GTF3A-202ENST00000419181 BIRC3Q13489 604 aa21.77■■□□□ 1.08
GTF3A-202ENST00000419181 EDRF1Q3B7T1 1238 aa21.77■■□□□ 1.08
GTF3A-202ENST00000419181 WDR72Q3MJ13 1102 aa21.77■■□□□ 1.08
GTF3A-202ENST00000419181 COBLL1Q53SF7 1204 aa21.77■■□□□ 1.08
GTF3A-202ENST00000419181 DNAJB7Q7Z6W7 309 aaPredicted RBP21.77■■□□□ 1.08
GTF3A-202ENST00000419181 SMARCE1Q969G3 411 aa21.77■■□□□ 1.08
GTF3A-202ENST00000419181 SYAP1Q96A49 352 aaPredicted RBP21.77■■□□□ 1.08
GTF3A-202ENST00000419181 MMS19Q96T76 1030 aa21.77■■□□□ 1.08
GTF3A-202ENST00000419181 VRTNQ9H8Y1 702 aa21.77■■□□□ 1.08
GTF3A-202ENST00000419181 IKBKBO14920 756 aa21.76■■□□□ 1.07
GTF3A-202ENST00000419181 KINO60870 393 aaKnown RBP21.76■■□□□ 1.07
GTF3A-202ENST00000419181 TACC1O75410 805 aa21.76■■□□□ 1.07
GTF3A-202ENST00000419181 PRCPP42785 496 aa21.76■■□□□ 1.07
GTF3A-202ENST00000419181 CCDC142Q17RM4 750 aa21.76■■□□□ 1.07
GTF3A-202ENST00000419181 ZACNQ401N2 412 aa21.76■■□□□ 1.07
GTF3A-202ENST00000419181 C1orf220Q5T0J3 134 aa21.76■■□□□ 1.07
GTF3A-202ENST00000419181 ITIH5Q86UX2 942 aa21.76■■□□□ 1.07
GTF3A-202ENST00000419181 SHKBP1Q8TBC3 707 aa21.76■■□□□ 1.07
GTF3A-202ENST00000419181 LPIN3Q9BQK8 851 aa21.76■■□□□ 1.07
GTF3A-202ENST00000419181 ZNF334Q9HCZ1 680 aaPredicted RBP21.76■■□□□ 1.07
GTF3A-202ENST00000419181 ABCB6Q9NP58 842 aa21.76■■□□□ 1.07
GTF3A-202ENST00000419181 GTF3C4Q9UKN8 822 aa21.76■■□□□ 1.07
GTF3A-202ENST00000419181 VNN1O95497 513 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 FAM163BP0C2L3 166 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 GJA1P17302 382 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 LMO2P25791 158 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 VAMP7P51809 220 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 TNNC1P63316 161 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 ADAM9Q13443 819 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 NCOA4Q13772 614 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 VEPH1Q14D04 833 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 FAM171BQ6P995 826 aa21.75■■□□□ 1.07
GTF3A-202ENST00000419181 INTS8Q75QN2 995 aaKnown RBP21.75■■□□□ 1.07
GTF3A-202ENST00000419181 KXD1Q9BQD3 176 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms