RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 HUS1O60921 280 aa22.14■■□□□ 1.13
PKNOX1-202ENST00000418336 HAPLN1P10915 354 aaPredicted RBP22.14■■□□□ 1.13
PKNOX1-202ENST00000418336 ACAT1P24752 427 aaKnown RBP22.14■■□□□ 1.13
PKNOX1-202ENST00000418336 LMO2P25791 158 aa22.14■■□□□ 1.13
PKNOX1-202ENST00000418336 MYL6P60660 151 aa22.14■■□□□ 1.13
PKNOX1-202ENST00000418336 INTS6LQ5JSJ4 861 aaKnown RBP22.14■■□□□ 1.13
PKNOX1-202ENST00000418336 ADGRF2Q8IZF7 708 aa22.14■■□□□ 1.13
PKNOX1-202ENST00000418336 THEM5Q8N1Q8 247 aa22.14■■□□□ 1.13
PKNOX1-202ENST00000418336 GSDMAQ96QA5 445 aa22.14■■□□□ 1.13
PKNOX1-202ENST00000418336 FNBP1Q96RU3 617 aa22.14■■□□□ 1.13
PKNOX1-202ENST00000418336 VRTNQ9H8Y1 702 aa22.14■■□□□ 1.13
PKNOX1-202ENST00000418336 DDX43Q9NXZ2 648 aaKnown RBP22.14■■□□□ 1.13
PKNOX1-202ENST00000418336 NCANO14594 1321 aa22.13■■□□□ 1.13
PKNOX1-202ENST00000418336 SMARCB1Q12824 385 aa22.13■■□□□ 1.13
PKNOX1-202ENST00000418336 FAM171BQ6P995 826 aa22.13■■□□□ 1.13
PKNOX1-202ENST00000418336 ZC3H3Q8IXZ2 948 aaKnown RBP22.13■■□□□ 1.13
PKNOX1-202ENST00000418336 SHKBP1Q8TBC3 707 aa22.13■■□□□ 1.13
PKNOX1-202ENST00000418336 TMC2Q8TDI7 906 aa22.13■■□□□ 1.13
PKNOX1-202ENST00000418336 C2orf15Q8WU43 125 aaKnown RBP22.13■■□□□ 1.13
PKNOX1-202ENST00000418336 PSMG2Q969U7 264 aa22.13■■□□□ 1.13
PKNOX1-202ENST00000418336 LPIN3Q9BQK8 851 aa22.13■■□□□ 1.13
PKNOX1-202ENST00000418336 MKNK1Q9BUB5 465 aa22.13■■□□□ 1.13
PKNOX1-202ENST00000418336 MRPS23Q9Y3D9 190 aaKnown RBP22.13■■□□□ 1.13
PKNOX1-202ENST00000418336 PTPRDP23468 1912 aa22.13■■□□□ 1.13
PKNOX1-202ENST00000418336 TULP1O00294 542 aaPredicted RBP22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 CALUO43852 315 aaPredicted RBP22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 NPR3P17342 541 aa22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 BMP6P22004 513 aa22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 WARSP23381 471 aaKnown RBP22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 PRCPP42785 496 aa22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 PMS1P54277 932 aaKnown RBP22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 MYO1EQ12965 1108 aa22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 ZACNQ401N2 412 aa22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 ZNF658Q5TYW1 1059 aaPredicted RBP22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 GAREM2Q75VX8 874 aa22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 SPPL2BQ8TCT7 592 aa22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 ZSWIM3Q96MP5 696 aa22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 MRPL45Q9BRJ2 306 aaKnown RBP22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 IL21Q9HBE4 155 aa22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 GDE1Q9NZC3 331 aa22.12■■□□□ 1.13
PKNOX1-202ENST00000418336 COL4A3Q01955 1670 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 MYBPHLA2RUH7 354 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 GOLGA6L4A6NEF3 574 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 ATP2C2O75185 946 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 TACC1O75410 805 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 KIF20AO95235 890 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 NR2F2P24468 414 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 GPR15P49685 360 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 EDRF1Q3B7T1 1238 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 PDZD4Q76G19 769 aaPredicted RBP22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 DNAJB7Q7Z6W7 309 aaPredicted RBP22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 CCDC47Q96A33 483 aaKnown RBP22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 PBXIP1Q96AQ6 731 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 ELMO3Q96BJ8 720 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 MCRS1Q96EZ8 462 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 ZNF512Q96ME7 567 aaPredicted RBP22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 PLA2G2FQ9BZM2 168 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 CRTAC1Q9NQ79 661 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 CHMP5Q9NZZ3 219 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 COL4A2P08572 1712 aa22.11■■□□□ 1.13
PKNOX1-202ENST00000418336 MUC6Q6W4X9 2439 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 KRBA1A5PL33 1030 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 FAM163BP0C2L3 166 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 SRFP11831 508 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 HMGA1P17096 107 aaKnown RBP22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 GJA1P17302 382 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 LHX1P48742 406 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 AP3M2P53677 418 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 VCPP55072 806 aaKnown RBP22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 PPP3CAQ08209 521 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 PLD1Q13393 1074 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 IER5LQ5T953 404 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 TMEM150AQ86TG1 271 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 DCP1BQ8IZD4 617 aaKnown RBP22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 ADSSL1Q8N142 457 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 FBXL6Q8N531 539 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 LEMD2Q8NC56 503 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 ASAH2Q9NR71 780 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 SLC2A4RGQ9NR83 387 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 GTF3C4Q9UKN8 822 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 ASB3Q9Y575 518 aa22.1■■□□□ 1.13
PKNOX1-202ENST00000418336 IKBKBO14920 756 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 ATICP31939 592 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 TUFMP49411 452 aaKnown RBP22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 EPHB3P54753 998 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 MYL7Q01449 175 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 ENPEPQ07075 957 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 FAM78AQ5JUQ0 283 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 CEP135Q66GS9 1140 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 CWF19L1Q69YN2 538 aaKnown RBP22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 TANGO2Q6ICL3 276 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 IQCEQ6IPM2 695 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 SV2AQ7L0J3 742 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 ELMOD1Q8N336 334 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 ASB16Q96NS5 453 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 SEPT5Q99719 369 aaPredicted RBP22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 PI4K2AQ9BTU6 479 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 SDCBP2Q9H190 292 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 ABCB6Q9NP58 842 aa22.09■■□□□ 1.13
PKNOX1-202ENST00000418336 ABI2Q9NYB9 513 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms