RNA–Protein interactions for RNA: ENST00000415919.2

PRAMEF9-201, Transcript of PRAME family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF9, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9-201ENST00000415919 HOXA2O43364 376 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 NOMO3P69849 1222 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 CENPCQ03188 943 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 PAN2Q504Q3 1202 aaKnown RBP13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 DCLRE1AQ6PJP8 1040 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 ZNF280BQ86YH2 543 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 PDCL2Q8N4E4 241 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 C3orf58Q8NDZ4 430 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 SLC35G2Q8TBE7 412 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 HASPINQ8TF76 798 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 KBTBD7Q8WVZ9 684 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 RFFLQ8WZ73 363 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 TRIM43Q96BQ3 446 aaPredicted RBP13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 ARHGEF26Q96DR7 871 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 NAPGQ99747 312 aaPredicted RBP13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 TBC1D13Q9NVG8 400 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 CTTNBP2NLQ9P2B4 639 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 CAPN6Q9Y6Q1 641 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 SCN5AQ14524 2016 aa13.35□□□□□ -0.27
PRAMEF9-201ENST00000415919 KIAA0355O15063 1070 aa13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 URI1O94763 535 aaPredicted RBP13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 DDHD2O94830 711 aa13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 LSM8O95777 96 aaKnown RBP13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 WARSP23381 471 aaKnown RBP13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 OR1G1P47890 313 aa13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 CNGA2Q16280 664 aa13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 WSCD1Q658N2 575 aa13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 DENND1BQ6P3S1 775 aa13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 NPAS4Q8IUM7 802 aa13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 RHOT2Q8IXI1 618 aa13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 MCOLN2Q8IZK6 566 aa13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 TMEM199Q8N511 208 aa13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 C1orf131Q8NDD1 294 aaKnown RBP13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 TRIM11Q96F44 468 aa13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 NCANO14594 1321 aa13.34□□□□□ -0.27
PRAMEF9-201ENST00000415919 PALMO75781 387 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 MICAL2O94851 1124 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 UPP2O95045 317 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 FAM163BP0C2L3 166 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 ODC1P11926 461 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 PAX3P23760 479 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 LMO2P25791 158 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 GATMP50440 423 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 STILQ15468 1287 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 TIGD5Q53EQ6 642 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 LIN9Q5TKA1 542 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 LIMS2Q7Z4I7 341 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 METTL23Q86XA0 190 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 TMEM86AQ8N2M4 240 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 C12orf29Q8N999 325 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 TNIP3Q96KP6 325 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 CASD1Q96PB1 797 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 C11orf70Q9BRQ4 267 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 ZNF518BQ9C0D4 1074 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 LHX5Q9H2C1 402 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 DPEP3Q9H4B8 488 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 ADAM22Q9P0K1 906 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 CNOT8Q9UFF9 292 aaKnown RBP13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 STXBP5LQ9Y2K9 1186 aa13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 TIMM13Q9Y5L4 95 aaPredicted RBP13.33□□□□□ -0.27
PRAMEF9-201ENST00000415919 TBKBP1A7MCY6 615 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 I3L4J1 428 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 M0QYV0 167 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 O00370 1275 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 FANCGO15287 622 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 ATMINO43313 823 aaPredicted RBP13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 HCRTO43612 131 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 MYBL1P10243 752 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 CSF2RAP15509 400 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 ITGB8P26012 769 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 BRCC3P46736 316 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 MMS22LQ6ZRQ5 1243 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 OSTM1Q86WC4 334 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 PHF13Q86YI8 300 aaPredicted RBP13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 COLGALT2Q8IYK4 626 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 OSGEPQ9NPF4 335 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 FAM49BQ9NUQ9 324 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 GTF3C4Q9UKN8 822 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 NME7Q9Y5B8 376 aa13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 TDRD15B5MCY1 1934 aaKnown RBP13.33□□□□□ -0.28
PRAMEF9-201ENST00000415919 ENC1O14682 589 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 KIF4AO95239 1232 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 CYP1A2P05177 515 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 LHX1P48742 406 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 AARSP49588 968 aaKnown RBP eCLIP13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 DSC1Q08554 894 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 GOLGA7BQ2TAP0 167 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 C2CD6Q53TS8 623 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 PPP1R26Q5T8A7 1209 aaPredicted RBP13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 MFSD5Q6N075 450 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 MON1BQ7L1V2 547 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 PHLDB2Q86SQ0 1253 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 ERICH1Q86X53 443 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 CRYBG2Q8N1P7 616 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 TPCN2Q8NHX9 752 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 UBA3Q8TBC4 463 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 VCPIP1Q96JH7 1222 aa13.32□□□□□ -0.28
PRAMEF9-201ENST00000415919 NUP85Q9BW27 656 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms