RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 TSSK4Q6SA08 328 aa16.74■□□□□ 0.27
ACTB-202ENST00000414620 ARID3BQ8IVW6 561 aaPredicted RBP16.74■□□□□ 0.27
ACTB-202ENST00000414620 MFSD6LQ8IWD5 586 aa16.74■□□□□ 0.27
ACTB-202ENST00000414620 PDCL2Q8N4E4 241 aa16.74■□□□□ 0.27
ACTB-202ENST00000414620 CSGALNACT2Q8N6G5 542 aa16.74■□□□□ 0.27
ACTB-202ENST00000414620 SPRYD3Q8NCJ5 442 aa16.74■□□□□ 0.27
ACTB-202ENST00000414620 SPPL2BQ8TCT7 592 aa16.74■□□□□ 0.27
ACTB-202ENST00000414620 CACTINQ8WUQ7 758 aaKnown RBP16.74■□□□□ 0.27
ACTB-202ENST00000414620 TRIM9Q9C026 710 aa16.74■□□□□ 0.27
ACTB-202ENST00000414620 TRPV4Q9HBA0 871 aa16.74■□□□□ 0.27
ACTB-202ENST00000414620 L1RE1Q9UN81 338 aa16.74■□□□□ 0.27
ACTB-202ENST00000414620 MRPS17Q9Y2R5 130 aaKnown RBP16.74■□□□□ 0.27
ACTB-202ENST00000414620 PTPRJQ12913 1337 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 HELZP42694 1942 aaKnown RBP16.73■□□□□ 0.27
ACTB-202ENST00000414620 NCAM2O15394 837 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 HCRTO43612 131 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 LMNAP02545 664 aaKnown RBP16.73■□□□□ 0.27
ACTB-202ENST00000414620 HAPLN1P10915 354 aaPredicted RBP16.73■□□□□ 0.27
ACTB-202ENST00000414620 CASP1P29466 404 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 PNPLA4P41247 253 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 SOX9P48436 509 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 TSPY1Q01534 308 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 CSTF1Q05048 431 aaKnown RBP16.73■□□□□ 0.27
ACTB-202ENST00000414620 TAF12Q16514 161 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 CCDC142Q17RM4 750 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 ARHGAP15Q53QZ3 475 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 SDHAF4Q5VUM1 108 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 STXBP4Q6ZWJ1 553 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 OSTM1Q86WC4 334 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 DCP1BQ8IZD4 617 aaKnown RBP16.73■□□□□ 0.27
ACTB-202ENST00000414620 TTC8Q8TAM2 541 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 CSGALNACT1Q8TDX6 532 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 FAM3CQ92520 227 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 CLDN23Q96B33 292 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 ZFYVE19Q96K21 471 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 GCNAQ96QF7 691 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 NELL2Q99435 816 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 PI4K2AQ9BTU6 479 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 SMG9Q9H0W8 520 aaKnown RBP16.73■□□□□ 0.27
ACTB-202ENST00000414620 IL21Q9HBE4 155 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 KBTBD4Q9NVX7 518 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 DDX43Q9NXZ2 648 aaKnown RBP16.73■□□□□ 0.27
ACTB-202ENST00000414620 HSFX1Q9UBD0 423 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 SIX4Q9UIU6 781 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 SNX9Q9Y5X1 595 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 FAM186AA6NE01 2351 aa16.73■□□□□ 0.27
ACTB-202ENST00000414620 ZFHX2Q9C0A1 2572 aaPredicted RBP16.73■□□□□ 0.27
ACTB-202ENST00000414620 SLC38A8A6NNN8 435 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 MAN2B1O00754 1011 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 DPYSL4O14531 572 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 PRAMEF12O95522 483 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 F13A1P00488 732 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 ZSCAN22P10073 491 aaPredicted RBP16.72■□□□□ 0.27
ACTB-202ENST00000414620 CCNE1P24864 410 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 MAGEA9P43362 315 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 FZD5Q13467 585 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 PKP1Q13835 747 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 CBWD2Q8IUF1 395 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 CXorf38Q8TB03 319 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 C2orf15Q8WU43 125 aaKnown RBP16.72■□□□□ 0.27
ACTB-202ENST00000414620 E2F7Q96AV8 911 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 ANKRD36BP1Q96IX9 119 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 LRRC3BQ96PB8 259 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 HINFPQ9BQA5 517 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 LRRC27Q9C0I9 530 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 BLZF1Q9H2G9 400 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 CUEDC2Q9H467 287 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 HSPBP1Q9NZL4 362 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 ITGA11Q9UKX5 1188 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 PCDHB5Q9Y5E4 795 aa16.72■□□□□ 0.27
ACTB-202ENST00000414620 ARNTLO00327 626 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 POLR2DO15514 142 aaKnown RBP16.71■□□□□ 0.27
ACTB-202ENST00000414620 HUS1O60921 280 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 PRPF40AO75400 957 aaKnown RBP16.71■□□□□ 0.27
ACTB-202ENST00000414620 FGF19O95750 216 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 CDC25CP30307 473 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 HOXD13P35453 343 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 RBP5P82980 135 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 MYL7Q01449 175 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 MTAPQ13126 283 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 INTS6LQ5JSJ4 861 aaKnown RBP16.71■□□□□ 0.27
ACTB-202ENST00000414620 FAM26FQ5R3K3 315 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 NELFCDQ8IXH7 590 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 ADGRF2Q8IZF7 708 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 LRRC52Q8N7C0 313 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 IQUBQ8NA54 791 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 OR5B17Q8NGF7 314 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 TASP1Q9H6P5 420 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 TRPV5Q9NQA5 729 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 INTS13Q9NVM9 706 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 FBXO4Q9UKT5 387 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 MAGED2Q9UNF1 606 aaPredicted RBP16.71■□□□□ 0.27
ACTB-202ENST00000414620 F5P12259 2224 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 DMDP11532 3685 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 ATG2BQ96BY7 2078 aa16.71■□□□□ 0.27
ACTB-202ENST00000414620 VPS13AQ96RL7 3174 aa16.71■□□□□ 0.26
ACTB-202ENST00000414620 ZNF233A6NK53 670 aa16.7■□□□□ 0.26
ACTB-202ENST00000414620 CLIC2O15247 247 aa16.7■□□□□ 0.26
ACTB-202ENST00000414620 CHADO15335 359 aa16.7■□□□□ 0.26
ACTB-202ENST00000414620 KINO60870 393 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms