RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 STK38LQ9Y2H1 464 aa15.8■□□□□ 0.12
TTC39A-208ENST00000413473 PARP14Q460N5 1801 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 SGK1O00141 431 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 ALOX15BO15296 676 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 ATG7O95352 703 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 CCDC142Q17RM4 750 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 TFDP3Q5H9I0 405 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 RNASEH2BQ5TBB1 312 aaKnown RBP15.79■□□□□ 0.12
TTC39A-208ENST00000413473 PRAMEF18Q5VWM3 479 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 GPAT2Q6NUI2 795 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 ASRGL1Q7L266 308 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 TDRPQ86YL5 185 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 WDTC1Q8N5D0 677 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 TMEM35BQ8NCS4 154 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 AGAP11Q8TF27 550 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 PRCCQ92733 491 aaPredicted RBP15.79■□□□□ 0.12
TTC39A-208ENST00000413473 STAMBPL1Q96FJ0 436 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 AS3MTQ9HBK9 375 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 UBN1Q9NPG3 1134 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 PICK1Q9NRD5 415 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 SAE1Q9UBE0 346 aaPredicted RBP15.79■□□□□ 0.12
TTC39A-208ENST00000413473 A8MUI8 341 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 GOLGA8SH3BPF8 625 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 GOLGA8MH3BSY2 632 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 CDKN2BP42772 138 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 ZNF280AP59817 542 aaPredicted RBP15.79■□□□□ 0.12
TTC39A-208ENST00000413473 EN1Q05925 392 aaPredicted RBP15.79■□□□□ 0.12
TTC39A-208ENST00000413473 ACVR2BQ13705 512 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 CAPSQ13938 189 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 STXBP2Q15833 593 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 CYP4A22Q5TCH4 519 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 WRNIP1Q96S55 665 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 MTMR12Q9C0I1 747 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 SLCO1B3Q9NPD5 702 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 CISHQ9NSE2 258 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 RLFQ13129 1914 aa15.79■□□□□ 0.12
TTC39A-208ENST00000413473 ADCY3O60266 1144 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 BANF1O75531 89 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 WEE2P0C1S8 567 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 ELF1P32519 619 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 RPA3P35244 121 aaPredicted RBP15.78■□□□□ 0.12
TTC39A-208ENST00000413473 PSMC4P43686 418 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 PDIA2Q13087 525 aaKnown RBP15.78■□□□□ 0.12
TTC39A-208ENST00000413473 SPARCL1Q14515 664 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 ERICH1Q86X53 443 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 N4BP2L2Q92802 583 aaPredicted RBP15.78■□□□□ 0.12
TTC39A-208ENST00000413473 SMC6Q96SB8 1091 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 NIFKQ9BYG3 293 aaKnown RBP15.78■□□□□ 0.12
TTC39A-208ENST00000413473 TMEM134Q9H6X4 195 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 PHTF1Q9UMS5 762 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 MAGEB2O15479 319 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 PRPF4O43172 522 aaKnown RBP eCLIP15.78■□□□□ 0.12
TTC39A-208ENST00000413473 LSM8O95777 96 aaKnown RBP15.78■□□□□ 0.12
TTC39A-208ENST00000413473 ALADP13716 330 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 PIGHQ14442 188 aaPredicted RBP15.78■□□□□ 0.12
TTC39A-208ENST00000413473 PPP1R15BQ5SWA1 713 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 CENPUQ71F23 418 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 ANKMY2Q8IV38 441 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 BRSK2Q8IWQ3 736 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 TFAP2BQ92481 460 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 NKD2Q969F2 451 aaPredicted RBP15.78■□□□□ 0.12
TTC39A-208ENST00000413473 C10orf88Q9H8K7 445 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 GRID1Q9ULK0 1009 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 STARD13Q9Y3M8 1113 aa15.78■□□□□ 0.12
TTC39A-208ENST00000413473 A0A1W2PPM1 405 aa15.77■□□□□ 0.12
TTC39A-208ENST00000413473 ITGAVP06756 1048 aa15.77■□□□□ 0.12
TTC39A-208ENST00000413473 RPSAP08865 295 aaKnown RBP15.77■□□□□ 0.12
TTC39A-208ENST00000413473 CA4P22748 312 aa15.77■□□□□ 0.12
TTC39A-208ENST00000413473 MSH2P43246 934 aa15.77■□□□□ 0.12
TTC39A-208ENST00000413473 CNTN2Q02246 1040 aa15.77■□□□□ 0.12
TTC39A-208ENST00000413473 ATP2A1O14983 1001 aa15.77■□□□□ 0.11
TTC39A-208ENST00000413473 ANP32DO95626 131 aa15.77■□□□□ 0.11
TTC39A-208ENST00000413473 CCNB1P14635 433 aa15.77■□□□□ 0.11
TTC39A-208ENST00000413473 DYNLT1P63172 113 aa15.77■□□□□ 0.11
TTC39A-208ENST00000413473 GAD2Q05329 585 aa15.77■□□□□ 0.11
TTC39A-208ENST00000413473 WDR49Q8IV35 697 aa15.77■□□□□ 0.11
TTC39A-208ENST00000413473 EBF2Q9HAK2 575 aa15.77■□□□□ 0.11
TTC39A-208ENST00000413473 ETNK1Q9HBU6 452 aa15.77■□□□□ 0.11
TTC39A-208ENST00000413473 PCDH9Q9HC56 1237 aa15.77■□□□□ 0.11
TTC39A-208ENST00000413473 DDX56Q9NY93 547 aaKnown RBP15.77■□□□□ 0.11
TTC39A-208ENST00000413473 SMG5Q9UPR3 1016 aaKnown RBP15.77■□□□□ 0.11
TTC39A-208ENST00000413473 UNC5CO95185 931 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 CCDC15Q0P6D6 951 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 MYO1EQ12965 1108 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 SLC1A5Q15758 541 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 DCAF15Q66K64 600 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 SCARA5Q6ZMJ2 495 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 CATSPERGQ6ZRH7 1159 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 MICALL2Q8IY33 904 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 SLC35B2Q8TB61 432 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 PRPF31Q8WWY3 499 aaKnown RBP15.76■□□□□ 0.11
TTC39A-208ENST00000413473 PCYT2Q99447 389 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 NIF3L1Q9GZT8 377 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 MYLK2Q9H1R3 596 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 SHOC2Q9UQ13 582 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 A0A1B0GUA9 196 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 FAM189A1O60320 539 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 ICAM3P32942 547 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 PTPN7P35236 360 aa15.76■□□□□ 0.11
TTC39A-208ENST00000413473 RFC1P35251 1148 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms