RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 MDGA1Q8NFP4 955 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 MDM1Q8TC05 714 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 PIGOQ8TEQ8 1089 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 USP33Q8TEY7 942 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 WHAMMQ8TF30 809 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 RLN3Q8WXF3 142 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 BSNDQ8WZ55 320 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 SLC39A7Q92504 469 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 MRPS31Q92665 395 aaKnown RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 USP13Q92995 863 aaPredicted RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CD101Q93033 1021 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CHFRQ96EP1 664 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 IFT74Q96LB3 600 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 ZMAT2Q96NC0 199 aaKnown RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 PGLYRP2Q96PD5 576 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 UBL7Q96S82 380 aaPredicted RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 KIF2CQ99661 725 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 SEPT5Q99719 369 aaPredicted RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 TCHPQ9BT92 498 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 POLR3CQ9BUI4 534 aaPredicted RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 SLC46A2Q9BY10 475 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 MRPL4Q9BYD3 311 aaKnown RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CCDC113Q9H0I3 377 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 SMG9Q9H0W8 520 aaKnown RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CRISPLD1Q9H336 500 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 TTC12Q9H892 705 aaPredicted RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 ECT2Q9H8V3 914 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 KIF9Q9HAQ2 790 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 IL21Q9HBE4 155 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 NCOA5Q9HCD5 579 aaKnown RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 POLMQ9NP87 494 aaPredicted RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 TMEM74BQ9NUR3 256 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 TDP1Q9NUW8 608 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 CNTN3Q9P232 1028 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 DKK4Q9UBT3 224 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 MBD1Q9UIS9 605 aaPredicted RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 PILRBQ9UKJ0 227 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 TBX20Q9UMR3 447 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 APOBEC2Q9Y235 224 aaKnown RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 USP20Q9Y2K6 914 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 SLC27A5Q9Y2P5 690 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 RAXQ9Y2V3 346 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 TIMM13Q9Y5L4 95 aaPredicted RBP2.58□□□□□ -2
RNU4-53P-201ENST00000410828 STK24Q9Y6E0 443 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 PHLPP2Q6ZVD8 1323 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 FREM2Q5SZK8 3169 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 NBASA2RRP1 2371 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 GREB1Q4ZG55 1949 aa2.58□□□□□ -2
RNU4-53P-201ENST00000410828 AKAP13Q12802 2813 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 A0A087WV48 116 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 ARHGEF35A5YM69 484 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 MYMKA6NI61 221 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CCDC169A6NNP5 214 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 J3QKU1 62 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 ARHGAP33O14559 1287 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CAPN9O14815 690 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 ATXN7O15265 892 aaPredicted RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 ZBTB24O43167 697 aaPredicted RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 XPOTO43592 962 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 SH3BP5O60239 455 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF217O75362 1048 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 SOAT2O75908 522 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CDKL5O76039 1030 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 LARGE1O95461 756 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 VNN2O95498 520 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 NFATC1O95644 943 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 PRB1P04280 392 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 EDN1P05305 212 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 FTH1P19P0C7X4 201 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 SPATA31C1P0DKV0 1188 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CSH1P0DML2 217 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CSH2P0DML3 217 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 HAPLN1P10915 354 aaPredicted RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 HARSP12081 509 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CD59P13987 128 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 PLA2G2AP14555 144 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CPA1P15085 419 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 GNSP15586 552 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 ATF6P18850 670 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 TYMPP19971 482 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CYP3A5P20815 502 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 ITPKAP23677 461 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 PAX3P23760 479 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 U2AF2P26368 475 aaKnown RBP eCLIP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 PSMA5P28066 241 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 LRPAP1P30533 357 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 ABCG1P45844 678 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 IFNAR2P48551 515 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 AARSP49588 968 aaKnown RBP eCLIP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 SEC13P55735 322 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 NLRP12P59046 1061 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 MRPS21P82921 87 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 RPL6Q02878 288 aaKnown RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF33AQ06730 810 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CYP4F3Q08477 520 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 DMP1Q13316 513 aaPredicted RBP2.57□□□□□ -2
RNU4-53P-201ENST00000410828 NBR1Q14596 966 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 MTF1Q14872 753 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 CALCRLQ16602 461 aa2.57□□□□□ -2
RNU4-53P-201ENST00000410828 HSF5Q4G112 596 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms