RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 PCDHB5Q9Y5E4 795 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 PIAS3Q9Y6X2 628 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 FAM186AA6NE01 2351 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 ZNF233A6NK53 670 aa15.63■□□□□ 0.09
MCF2L-210ENST00000409954 TULP1O00294 542 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-210ENST00000409954 ITGB3P05106 788 aa15.63■□□□□ 0.09
MCF2L-210ENST00000409954 LHX1P48742 406 aa15.63■□□□□ 0.09
MCF2L-210ENST00000409954 KPNA1P52294 538 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-210ENST00000409954 PLCB2Q00722 1185 aa15.63■□□□□ 0.09
MCF2L-210ENST00000409954 GPR158Q5T848 1215 aa15.63■□□□□ 0.09
MCF2L-210ENST00000409954 GPD1LQ8N335 351 aa15.63■□□□□ 0.09
MCF2L-210ENST00000409954 IQUBQ8NA54 791 aa15.63■□□□□ 0.09
MCF2L-210ENST00000409954 NELL1Q92832 810 aa15.63■□□□□ 0.09
MCF2L-210ENST00000409954 SNX21Q969T3 373 aa15.63■□□□□ 0.09
MCF2L-210ENST00000409954 SAAL1Q96ER3 474 aa15.63■□□□□ 0.09
MCF2L-210ENST00000409954 CHRDQ9H2X0 955 aa15.63■□□□□ 0.09
MCF2L-210ENST00000409954 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
MCF2L-210ENST00000409954 KBTBD4Q9NVX7 518 aa15.63■□□□□ 0.09
MCF2L-210ENST00000409954 TFIP11Q9UBB9 837 aaKnown RBP15.63■□□□□ 0.09
MCF2L-210ENST00000409954 A0A087X0B3 334 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 ARNTLO00327 626 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 CUTAO60888 179 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 SOAT2O75908 522 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 PRPF6O94906 941 aaKnown RBP15.62■□□□□ 0.09
MCF2L-210ENST00000409954 YEATS4O95619 227 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 CSH1P0DML2 217 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 CSH2P0DML3 217 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 CCNE1P24864 410 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 POLR2BP30876 1174 aaKnown RBP15.62■□□□□ 0.09
MCF2L-210ENST00000409954 ID4P47928 161 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 CASP5P51878 434 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 MYL7Q01449 175 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 MYO1EQ12965 1108 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 MTAPQ13126 283 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 DUOXA2Q1HG44 320 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 CNNM4Q6P4Q7 775 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 RALGPS2Q86X27 583 aaPredicted RBP15.62■□□□□ 0.09
MCF2L-210ENST00000409954 TTC9BQ8N6N2 239 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 GPR161Q8N6U8 529 aaKnown RBP15.62■□□□□ 0.09
MCF2L-210ENST00000409954 CELF5Q8N6W0 485 aaKnown RBP15.62■□□□□ 0.09
MCF2L-210ENST00000409954 C1orf127Q8N9H9 656 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 SUMF1Q8NBK3 374 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 ANKRD36BP1Q96IX9 119 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 CBWD1Q9BRT8 395 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 MKNK1Q9BUB5 465 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 PCIF1Q9H4Z3 704 aa15.62■□□□□ 0.09
MCF2L-210ENST00000409954 GOLGA8IPA6NC78 632 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 GOLGA8JA6NMD2 632 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 PRPF40AO75400 957 aaKnown RBP15.61■□□□□ 0.09
MCF2L-210ENST00000409954 TMEM191BP0C7N4 346 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 CHRNB1P11230 501 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 ATF6P18850 670 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 DDX6P26196 483 aaKnown RBP eCLIP15.61■□□□□ 0.09
MCF2L-210ENST00000409954 CCR3P51677 355 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 SNRPFP62306 86 aaKnown RBP15.61■□□□□ 0.09
MCF2L-210ENST00000409954 RPL10AP62906 217 aaKnown RBP15.61■□□□□ 0.09
MCF2L-210ENST00000409954 DGKKQ5KSL6 1271 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 ATL3Q6DD88 541 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 ERMP1Q7Z2K6 904 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 PDCL2Q8N4E4 241 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 ZNF507Q8TCN5 953 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 BPIFB1Q8TDL5 484 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 GIPC2Q8TF65 315 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 LEO1Q8WVC0 666 aaPredicted RBP15.61■□□□□ 0.09
MCF2L-210ENST00000409954 SECISBP2LQ93073 1101 aaKnown RBP15.61■□□□□ 0.09
MCF2L-210ENST00000409954 LPIN3Q9BQK8 851 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 SLC46A2Q9BY10 475 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 TRIM9Q9C026 710 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 IL21Q9HBE4 155 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 PDE11AQ9HCR9 933 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 ABCB6Q9NP58 842 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 INTS13Q9NVM9 706 aa15.61■□□□□ 0.09
MCF2L-210ENST00000409954 DDX43Q9NXZ2 648 aaKnown RBP15.61■□□□□ 0.09
MCF2L-210ENST00000409954 ABI2Q9NYB9 513 aaPredicted RBP15.61■□□□□ 0.09
MCF2L-210ENST00000409954 CACNA1IQ9P0X4 2223 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 MYBPHLA2RUH7 354 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 EIF3DO15371 548 aaKnown RBP eCLIP15.6■□□□□ 0.093e-6■□□□□ 9
MCF2L-210ENST00000409954 LILRB5O75023 590 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 F11P03951 625 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 KRT19P08727 400 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 FAM163BP0C2L3 166 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 PCSK1P29120 753 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 CXCL12P48061 93 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 LRRC32Q14392 662 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 E2F4Q16254 413 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 STXBP5Q5T5C0 1151 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 CMTM8Q8IZV2 173 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 SYNPOQ8N3V7 929 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 TOP6BLQ8N6T0 577 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 ZSWIM2Q8NEG5 633 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 CXorf38Q8TB03 319 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 RSPRY1Q96DX4 576 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 C7orf25Q9BPX7 421 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 HINFPQ9BQA5 517 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 MAGEF1Q9HAY2 307 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 PRMT8Q9NR22 394 aaPredicted RBP15.6■□□□□ 0.09
MCF2L-210ENST00000409954 UXTQ9UBK9 157 aaPredicted RBP15.6■□□□□ 0.09
MCF2L-210ENST00000409954 SNX9Q9Y5X1 595 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 MYH15Q9Y2K3 1946 aa15.6■□□□□ 0.09
MCF2L-210ENST00000409954 USP34Q70CQ2 3546 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms