RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PGLYRP2Q96PD5 576 aa21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 PHF7Q9BWX1 381 aaPredicted RBP21.26■□□□□ 0.99
PDLIM2-207ENST00000409417 MTMR11A4FU01 709 aa21.25■□□□□ 0.99
PDLIM2-207ENST00000409417 XYLBO75191 536 aa21.25■□□□□ 0.99
PDLIM2-207ENST00000409417 CLSTN1O94985 981 aa21.25■□□□□ 0.99
PDLIM2-207ENST00000409417 VNN2O95498 520 aa21.25■□□□□ 0.99
PDLIM2-207ENST00000409417 SLC39A12Q504Y0 691 aa21.25■□□□□ 0.99
PDLIM2-207ENST00000409417 ATAD1Q8NBU5 361 aa21.25■□□□□ 0.99
PDLIM2-207ENST00000409417 MRPL45Q9BRJ2 306 aaKnown RBP21.25■□□□□ 0.99
PDLIM2-207ENST00000409417 POMKQ9H5K3 350 aa21.25■□□□□ 0.99
PDLIM2-207ENST00000409417 PIDD1Q9HB75 910 aa21.25■□□□□ 0.99
PDLIM2-207ENST00000409417 TMEM63CQ9P1W3 806 aa21.25■□□□□ 0.99
PDLIM2-207ENST00000409417 HSFX1Q9UBD0 423 aa21.25■□□□□ 0.99
PDLIM2-207ENST00000409417 POLIQ9UNA4 740 aa21.25■□□□□ 0.99
PDLIM2-207ENST00000409417 INSL5Q9Y5Q6 135 aa21.25■□□□□ 0.99
PDLIM2-207ENST00000409417 TCF20Q9UGU0 1960 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 PTMSP20962 102 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 LMO2P25791 158 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 GNL1P36915 607 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 ZP2Q05996 745 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 DUSP4Q13115 394 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 CBWD6Q4V339 395 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 INTS6LQ5JSJ4 861 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 CBWD3Q5JTY5 395 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 CBWD5Q5RIA9 395 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 SASS6Q6UVJ0 657 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 TRIM59Q8IWR1 403 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 CCDC150Q8NCX0 1101 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 C2orf15Q8WU43 125 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 ELMO3Q96BJ8 720 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 UHRF1Q96T88 793 aaPredicted RBP21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 PI4K2AQ9BTU6 479 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 SNX25Q9H3E2 840 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 WDR6Q9NNW5 1121 aaKnown RBP21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 COQ4Q9Y3A0 265 aa21.24■□□□□ 0.99
PDLIM2-207ENST00000409417 CCL16O15467 120 aa21.23■□□□□ 0.99
PDLIM2-207ENST00000409417 CCDC192P0DO97 292 aa21.23■□□□□ 0.99
PDLIM2-207ENST00000409417 ACAT1P24752 427 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-207ENST00000409417 NOP14P78316 857 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-207ENST00000409417 NFE2Q16621 373 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-207ENST00000409417 SPOPLQ6IQ16 392 aa21.23■□□□□ 0.99
PDLIM2-207ENST00000409417 SEMA4DQ92854 862 aa21.23■□□□□ 0.99
PDLIM2-207ENST00000409417 NECAB3Q96P71 396 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-207ENST00000409417 PKMYT1Q99640 499 aa21.23■□□□□ 0.99
PDLIM2-207ENST00000409417 SMYD3Q9H7B4 428 aa21.23■□□□□ 0.99
PDLIM2-207ENST00000409417 RAB20Q9NX57 234 aa21.23■□□□□ 0.99
PDLIM2-207ENST00000409417 CDH9Q9ULB4 789 aa21.23■□□□□ 0.99
PDLIM2-207ENST00000409417 PMM2O15305 246 aa21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 HCRTO43612 131 aa21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 LRG1P02750 347 aa21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 PDGFRBP09619 1106 aa21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 ASPAP45381 313 aa21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 FMO5P49326 533 aa21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 TPD52L1Q16890 204 aaPredicted RBP21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 KLHL40Q2TBA0 621 aa21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 OR6B3Q8NGW1 331 aa21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 SYT15Q9BQS2 421 aa21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 CRISPLD1Q9H336 500 aa21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 APOBEC3GQ9HC16 384 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 ANO10Q9NW15 660 aa21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 SLC27A5Q9Y2P5 690 aa21.22■□□□□ 0.99
PDLIM2-207ENST00000409417 N4BP1O75113 896 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 CDH8P55286 799 aa21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 CAVIN1Q6NZI2 390 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 FAM171BQ6P995 826 aa21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 SCARA5Q6ZMJ2 495 aa21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 IRF2BP1Q8IU81 584 aa21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 SPPL2BQ8TCT7 592 aa21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 FAXDC2Q96IV6 333 aa21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 BCO2Q9BYV7 579 aa21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 NIF3L1Q9GZT8 377 aa21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 TMLHEQ9NVH6 421 aa21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 GTF3C4Q9UKN8 822 aa21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 YIPF1Q9Y548 306 aa21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 PCDHB5Q9Y5E4 795 aa21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.21■□□□□ 0.99
PDLIM2-207ENST00000409417 MYBPHLA2RUH7 354 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 C19orf67A6NJJ6 358 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 LRRN2O75325 713 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 TUFMP49411 452 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 TWF1Q12792 350 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 PLD1Q13393 1074 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 MAPRE1Q15691 268 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 STX1AQ16623 288 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 WDR44Q5JSH3 913 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 CNOT6LQ96LI5 555 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 COL25A1Q9BXS0 654 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 SDCBP2Q9H190 292 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 THAP9Q9H5L6 903 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 CYP3A43Q9HB55 503 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 ABCB6Q9NP58 842 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 ABI2Q9NYB9 513 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 NR2E1Q9Y466 385 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 NME7Q9Y5B8 376 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 CLUHO75153 1309 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 A8MXQ7 604 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 LOC730098B7Z3J9 87 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 P4HA2O15460 535 aa21.2■□□□□ 0.98
PDLIM2-207ENST00000409417 ATP2C2O75185 946 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms