RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 MLNP12872 115 aa11.2□□□□□ -0.62
LTBP1-204ENST00000407925 VCAM1P19320 739 aa11.2□□□□□ -0.62
LTBP1-204ENST00000407925 EXOSC10Q01780 885 aaKnown RBP11.2□□□□□ -0.62
LTBP1-204ENST00000407925 POU4F1Q01851 419 aa11.2□□□□□ -0.62
LTBP1-204ENST00000407925 ITGA9Q13797 1035 aa11.2□□□□□ -0.62
LTBP1-204ENST00000407925 PHKG1Q16816 387 aa11.2□□□□□ -0.62
LTBP1-204ENST00000407925 MMGT1Q8N4V1 131 aa11.2□□□□□ -0.62
LTBP1-204ENST00000407925 ZNF280CQ8ND82 737 aa11.2□□□□□ -0.62
LTBP1-204ENST00000407925 SPATA18Q8TC71 538 aa11.2□□□□□ -0.62
LTBP1-204ENST00000407925 UCMAQ8WVF2 138 aa11.2□□□□□ -0.62
LTBP1-204ENST00000407925 KLHL11Q9NVR0 708 aa11.2□□□□□ -0.62
LTBP1-204ENST00000407925 C6orf203Q9P0P8 240 aaPredicted RBP11.2□□□□□ -0.62
LTBP1-204ENST00000407925 PDP2Q9P2J9 529 aa11.2□□□□□ -0.62
LTBP1-204ENST00000407925 GTF3C4Q9UKN8 822 aa11.2□□□□□ -0.62
LTBP1-204ENST00000407925 CEP170Q5SW79 1584 aa11.2□□□□□ -0.62
LTBP1-204ENST00000407925 USP42Q9H9J4 1324 aaKnown RBP11.2□□□□□ -0.62
LTBP1-204ENST00000407925 PRRG1O14668 218 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 SERPIND1P05546 499 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 RBP3P10745 1247 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 PPP3CCP48454 512 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 VSNL1P62760 191 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 ACTN3Q08043 901 aaPredicted RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 KYNUQ16719 465 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 EPHA10Q5JZY3 1008 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 ATF7IP2Q5U623 682 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 NOTUMQ6P988 496 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 MICU2Q8IYU8 434 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 DNAJC9Q8WXX5 260 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 NSL1Q96IY1 281 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 MCEEQ96PE7 176 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 SH3GL1Q99961 368 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 UBQLN1Q9UMX0 589 aaKnown RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 PSTPIP1O43586 416 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 GLRA3O75311 464 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 EGFRP00533 1210 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 CNTFP26441 200 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 TRIP10Q15642 601 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 NLRP9Q7RTR0 991 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 FEZF2Q8TBJ5 459 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 C17orf80Q9BSJ5 609 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 ZFYVE28Q9HCC9 887 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 NPHS2Q9NP85 383 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 PCMTD2Q9NV79 361 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 AAR2Q9Y312 384 aaKnown RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 FHOD1Q9Y613 1164 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 F8W810 466 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 HOXA2O43364 376 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 TIMM44O43615 452 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 DYRK3O43781 588 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 LZTS3O60299 673 aaPredicted RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 NMT2O60551 498 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 ALOX15P16050 662 aaPredicted RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 RPA1P27694 616 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 GYS2P54840 703 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 GEMIN4P57678 1058 aaKnown RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 RABL6Q3YEC7 729 aaPredicted RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 TIGD7Q6NT04 549 aaPredicted RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 METTL16Q86W50 562 aaKnown RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 COL23A1Q86Y22 540 aaPredicted RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 AGAP3Q96P47 875 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 REEP2Q9BRK0 252 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 OSBPL10Q9BXB5 764 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 EMILIN2Q9BXX0 1053 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 VCPKMTQ9H867 229 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 TRPC7Q9HCX4 862 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 CTNNAL1Q9UBT7 734 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 TUBE1Q9UJT0 475 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 H7C4K7 107 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 STX7O15400 261 aaKnown RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 ZC3H11AO75152 810 aaKnown RBP eCLIP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 HLA-DRAP01903 254 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 FAM200BP0CF97 657 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 STAG3L1P0CL83 205 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 ALDH1A3P47895 512 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 SLC11A2P49281 568 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 TAF6P49848 677 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 FXR2P51116 673 aaKnown RBP eCLIP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 HMGCS2P54868 508 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 TRIM71Q2Q1W2 868 aaKnown RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 C3orf62Q6ZUJ4 267 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 NSUN4Q96CB9 384 aaKnown RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 GPRASP2Q96D09 838 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 ATXN7L3BQ96GX2 97 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 LBHD1Q9BQE6 289 aaPredicted RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 UBE2OQ9C0C9 1292 aaKnown RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 TMEM117Q9H0C3 514 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 ILKAPQ9H0C8 392 aaPredicted RBP11.19□□□□□ -0.62
LTBP1-204ENST00000407925 BRD8Q9H0E9 1235 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 MANSC1Q9H8J5 431 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 IMPAD1Q9NX62 359 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 CRLS1Q9UJA2 301 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 RAD54BQ9Y620 910 aa11.19□□□□□ -0.62
LTBP1-204ENST00000407925 C2orf81A6NN90 581 aa11.18□□□□□ -0.62
LTBP1-204ENST00000407925 RHOBTB1O94844 696 aa11.18□□□□□ -0.62
LTBP1-204ENST00000407925 SEC24DO94855 1032 aaPredicted RBP11.18□□□□□ -0.62
LTBP1-204ENST00000407925 PGK2P07205 417 aa11.18□□□□□ -0.62
LTBP1-204ENST00000407925 PSMA4P25789 261 aaKnown RBP11.18□□□□□ -0.62
LTBP1-204ENST00000407925 SRBD1Q8N5C6 995 aaKnown RBP11.18□□□□□ -0.62
LTBP1-204ENST00000407925 CYGBQ8WWM9 190 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms