RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 SNX17Q15036 470 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 SGO2Q562F6 1265 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 C7orf31Q8N865 590 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 BEST2Q8NFU1 509 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 ZIM3Q96PE6 472 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 LRRC19Q9H756 370 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 TLL2Q9Y6L7 1015 aa26.12■■□□□ 1.77
DNMT3A-206ENST00000406659 GJC1P36383 396 aa26.11■■□□□ 1.77
DNMT3A-206ENST00000406659 DRG2P55039 364 aaKnown RBP26.11■■□□□ 1.77
DNMT3A-206ENST00000406659 IQCKQ8N0W5 287 aa26.11■■□□□ 1.77
DNMT3A-206ENST00000406659 PIN4Q9Y237 131 aaKnown RBP26.11■■□□□ 1.77
DNMT3A-206ENST00000406659 MICAL2O94851 1124 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 CETN2P41208 172 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 INCA1Q0VD86 236 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 PIGHQ14442 188 aaPredicted RBP26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 CNGA2Q16280 664 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 PTPN20Q4JDL3 420 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 PPP1R15BQ5SWA1 713 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 NME8Q8N427 588 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 SH3GL2Q99962 352 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 SYNCQ9H7C4 482 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 HES2Q9Y543 173 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 GOLGA8KD6RF30 607 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 NDST1P52848 882 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 PURAQ00577 322 aaKnown RBP26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 EXD1Q8NHP7 514 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 C1orf54Q8WWF1 131 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 ZMAT2Q96NC0 199 aaKnown RBP26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 CXCL16Q9H2A7 254 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 CYTH4Q9UIA0 394 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 KIAA1257Q9ULG3 409 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 SNX24Q9Y343 169 aa26.1■■□□□ 1.77
DNMT3A-206ENST00000406659 GOLGA8SH3BPF8 625 aa26.09■■□□□ 1.77
DNMT3A-206ENST00000406659 O00370 1275 aa26.09■■□□□ 1.77
DNMT3A-206ENST00000406659 KPNA6O60684 536 aa26.09■■□□□ 1.77
DNMT3A-206ENST00000406659 DUSP11O75319 330 aaKnown RBP26.09■■□□□ 1.77
DNMT3A-206ENST00000406659 GBP1P32455 592 aa26.09■■□□□ 1.77
DNMT3A-206ENST00000406659 CRYBB1P53674 252 aaPredicted RBP26.09■■□□□ 1.77
DNMT3A-206ENST00000406659 PSMC1P62191 440 aaKnown RBP26.09■■□□□ 1.77
DNMT3A-206ENST00000406659 EXOC4Q96A65 974 aa26.09■■□□□ 1.77
DNMT3A-206ENST00000406659 APOL6Q9BWW8 343 aa26.09■■□□□ 1.77
DNMT3A-206ENST00000406659 NXF3Q9H4D5 531 aaKnown RBP26.09■■□□□ 1.77
DNMT3A-206ENST00000406659 WDR35Q9P2L0 1181 aa26.09■■□□□ 1.77
DNMT3A-206ENST00000406659 PASKQ96RG2 1323 aa26.09■■□□□ 1.77
DNMT3A-206ENST00000406659 M0QYV0 167 aa26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 RECQL4O94761 1208 aa26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 HMGCRP04035 888 aa26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 C6orf222P0C671 652 aaPredicted RBP26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 CTGFP29279 349 aa26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 KCNJ1P48048 391 aa26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 DMTNQ08495 405 aa26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 ZBTB6Q15916 424 aa26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 ZNF771Q7L3S4 317 aaPredicted RBP26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 TMEM40Q8WWA1 233 aa26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 PIK3R5Q8WYR1 880 aa26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 FMO2Q99518 471 aa26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 NT5C1AQ9BXI3 368 aa26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 FAM204AQ9H8W3 233 aa26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 RALGAPA2Q2PPJ7 1873 aa26.08■■□□□ 1.77
DNMT3A-206ENST00000406659 TRIP12Q14669 1992 aaPredicted RBP26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 SIGLEC16A6NMB1 481 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 CA12O43570 354 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 ECEL1O95672 775 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 RALAP11233 206 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 TM4SF4P48230 202 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 ZNF252P-AS1Q0IIN9 211 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 MTMR3Q13615 1198 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 ZFYVE27Q5T4F4 411 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 MFSD14CQ5VZR4 134 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 ALKAL1Q6UXT8 129 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 DPH6Q7L8W6 267 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 RCOR2Q8IZ40 523 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 TRPV1Q8NER1 839 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 HEMGNQ9BXL5 484 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 CNTN3Q9P232 1028 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 ABT1Q9ULW3 272 aaKnown RBP26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 PTPN22Q9Y2R2 807 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 F8VP50 259 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 KRT3P12035 628 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 FLT3P36888 993 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 HSD17B3P37058 310 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 FCGRTP55899 365 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 OGDHQ02218 1023 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 SNX1Q13596 522 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 ZNF268Q14587 947 aaPredicted RBP26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 LRRC38Q5VT99 294 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 NIPA2Q8N8Q9 360 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 C18orf25Q96B23 403 aaPredicted RBP26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 RBM41Q96IZ5 413 aaKnown RBP26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 CPXM1Q96SM3 734 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 OSBPL8Q9BZF1 889 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 HOMER3Q9NSC5 361 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 TUBGCP4Q9UGJ1 667 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 PARP2Q9UGN5 583 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 TRIP11Q15643 1979 aa26.07■■□□□ 1.76
DNMT3A-206ENST00000406659 AKAP5P24588 427 aa26.06■■□□□ 1.76
DNMT3A-206ENST00000406659 PPP1R7Q15435 360 aa26.06■■□□□ 1.76
DNMT3A-206ENST00000406659 LRRC52Q8N7C0 313 aa26.06■■□□□ 1.76
DNMT3A-206ENST00000406659 DCLK3Q9C098 648 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms