RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 C19orf81C9J6K1 198 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 M0R3G1 203 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 KRT75O95678 551 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 FAM200BP0CF97 657 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 CHI3L1P36222 383 aaPredicted RBP12.55□□□□□ -0.4
SMCR8-201ENST00000406438 CDH18Q13634 790 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 IPMKQ8NFU5 416 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 RSAD1Q9HA92 442 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 STMN3Q9NZ72 180 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 USP15Q9Y4E8 981 aaPredicted RBP12.55□□□□□ -0.4
SMCR8-201ENST00000406438 POLRMTO00411 1230 aaKnown RBP12.55□□□□□ -0.4
SMCR8-201ENST00000406438 ZBTB7AO95365 584 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 EIF2S1P05198 315 aaKnown RBP12.55□□□□□ -0.4
SMCR8-201ENST00000406438 SNRPFP62306 86 aaKnown RBP12.55□□□□□ -0.4
SMCR8-201ENST00000406438 CNDP1Q96KN2 507 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 RBBP8Q99708 897 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 MARCOQ9UEW3 520 aaPredicted RBP12.55□□□□□ -0.4
SMCR8-201ENST00000406438 SNTNA6NMZ2 147 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 EPB42P16452 691 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 PLOD1Q02809 727 aaPredicted RBP12.55□□□□□ -0.4
SMCR8-201ENST00000406438 LONP2Q86WA8 852 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 SH3GL3Q99963 347 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 MYO18AQ92614 2054 aaKnown RBP12.55□□□□□ -0.4
SMCR8-201ENST00000406438 NFIBO00712 420 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 PRIM2P49643 509 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 ZFYVE28Q9HCC9 887 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 HEATR9A2RTY3 570 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 ODC1P11926 461 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 PSMA4P25789 261 aaKnown RBP12.55□□□□□ -0.4
SMCR8-201ENST00000406438 RAB14P61106 215 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 C10orf120Q5SQS8 335 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 P3H2Q8IVL5 708 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 GRID1Q9ULK0 1009 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 SNX12Q9UMY4 172 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 CDHR2Q9BYE9 1310 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 RFC5P40937 340 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 ARHGAP17Q68EM7 881 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 TMEM117Q9H0C3 514 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMCR8-201ENST00000406438 GRAP2O75791 330 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 ALBP02768 609 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 EFHC1Q5JVL4 640 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 IL1RL2Q9HB29 575 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 ADGRG1Q9Y653 693 aa12.55□□□□□ -0.4
SMCR8-201ENST00000406438 CHRM3P20309 590 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 ATF7IP2Q5U623 682 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 LMBRD2Q68DH5 695 aaPredicted RBP12.54□□□□□ -0.4
SMCR8-201ENST00000406438 HPDLQ96IR7 371 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 LZTS1Q9Y250 596 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 MYH1P12882 1939 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 MYH2Q9UKX2 1941 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 MYH4Q9Y623 1939 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 CTSHP09668 335 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 SLC2A3P11169 496 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 CHN1P15882 459 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 SERPINB1P30740 379 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 ACTN3Q08043 901 aaPredicted RBP12.54□□□□□ -0.4
SMCR8-201ENST00000406438 LRRC8DQ7L1W4 858 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 VPS33BQ9H267 617 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 DMAP1Q9NPF5 467 aaPredicted RBP12.54□□□□□ -0.4
SMCR8-201ENST00000406438 DIABLOQ9NR28 239 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 LONRF1Q17RB8 773 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 AGAP9Q5VTM2 703 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 ICE2Q659A1 982 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 IFNEQ86WN2 208 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 GALNT4Q8N4A0 578 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 RPRD1BQ9NQG5 326 aaKnown RBP12.54□□□□□ -0.4
SMCR8-201ENST00000406438 TRMT6Q9UJA5 497 aaKnown RBP12.54□□□□□ -0.4
SMCR8-201ENST00000406438 TRPC5OSA6NMA1 111 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 MAP3K13O43283 966 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 ST13P50502 369 aaKnown RBP12.54□□□□□ -0.4
SMCR8-201ENST00000406438 ERAP2Q6P179 960 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 CCDC60Q8IWA6 550 aaPredicted RBP12.54□□□□□ -0.4
SMCR8-201ENST00000406438 TRMT2AQ8IZ69 625 aaKnown RBP12.54□□□□□ -0.4
SMCR8-201ENST00000406438 AGGF1Q8N302 714 aaeCLIP12.54□□□□□ -0.4
SMCR8-201ENST00000406438 SLC25A41Q8N5S1 370 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 WDCPQ9H6R7 721 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 TMEM8AQ9HCN3 771 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 SLC39A10Q9ULF5 831 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 MZF1P28698 734 aaPredicted RBP12.54□□□□□ -0.4
SMCR8-201ENST00000406438 CSE1LP55060 971 aaKnown RBP12.54□□□□□ -0.4
SMCR8-201ENST00000406438 GOLGA7BQ2TAP0 167 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 TKFCQ3LXA3 575 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 CACHD1Q5VU97 1274 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 USP33Q8TEY7 942 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 ELP3Q9H9T3 547 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 SLC24A3Q9HC58 644 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMCR8-201ENST00000406438 PP2D1A8MPX8 630 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 TCN1P20061 433 aaPredicted RBP12.54□□□□□ -0.4
SMCR8-201ENST00000406438 SREBF2Q12772 1141 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 TMEM132BQ14DG7 1078 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 SMTNL2Q2TAL5 461 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 ZNF677Q86XU0 584 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 JADE3Q92613 823 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 SCUBE2Q9NQ36 999 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 RNF112Q9ULX5 631 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 CROCCQ5TZA2 2017 aa12.54□□□□□ -0.4
SMCR8-201ENST00000406438 SMAPO00193 183 aa12.53□□□□□ -0.4
SMCR8-201ENST00000406438 SOAT2O75908 522 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms