RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 WHAMMQ8TF30 809 aa12.54□□□□□ -0.4
SMS-202ENST00000404933 TMEM40Q8WWA1 233 aa12.54□□□□□ -0.4
SMS-202ENST00000404933 CELF4Q9BZC1 486 aaKnown RBP12.54□□□□□ -0.4
SMS-202ENST00000404933 TRIM7Q9C029 511 aa12.54□□□□□ -0.4
SMS-202ENST00000404933 IP6K2Q9UHH9 426 aa12.54□□□□□ -0.4
SMS-202ENST00000404933 MTUS1Q9ULD2 1270 aa12.54□□□□□ -0.4
SMS-202ENST00000404933 KIAA1257Q9ULG3 409 aa12.54□□□□□ -0.4
SMS-202ENST00000404933 BARX2Q9UMQ3 279 aaPredicted RBP12.54□□□□□ -0.4
SMS-202ENST00000404933 SRRM3A6NNA2 597 aaPredicted RBP12.53□□□□□ -0.4
SMS-202ENST00000404933 KIF3CO14782 793 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 XPOTO43592 962 aaKnown RBP12.53□□□□□ -0.4
SMS-202ENST00000404933 RECQL4O94761 1208 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 VDRP11473 427 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 PRKCZQ05513 592 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 CUL1Q13616 776 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 EMC10Q5UCC4 262 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 DENND1BQ6P3S1 775 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 RSPH3Q86UC2 560 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 TMEM130Q8N3G9 435 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 WDTC1Q8N5D0 677 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 LRRC52Q8N7C0 313 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 IFT81Q8WYA0 676 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 CAVIN3Q969G5 261 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 ZMAT2Q96NC0 199 aaKnown RBP12.53□□□□□ -0.4
SMS-202ENST00000404933 SH3GL2Q99962 352 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 ELOVL4Q9GZR5 314 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 NXF3Q9H4D5 531 aaKnown RBP12.53□□□□□ -0.4
SMS-202ENST00000404933 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.53□□□□□ -0.4
SMS-202ENST00000404933 AMACRQ9UHK6 382 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 GTF2IRD1Q9UHL9 959 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 UBQLN1Q9UMX0 589 aaKnown RBP12.53□□□□□ -0.4
SMS-202ENST00000404933 HES2Q9Y543 173 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 GOLGA6BA6NDN3 693 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 TMEM191CA6NGB0 347 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 PSTPIP1O43586 416 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 PHF2O75151 1096 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 PGK1P00558 417 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 HMGCRP04035 888 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 RPLP2P05387 115 aaKnown RBP12.53□□□□□ -0.4
SMS-202ENST00000404933 ATF7P17544 494 aaPredicted RBP12.53□□□□□ -0.4
SMS-202ENST00000404933 CARSP49589 748 aaKnown RBP12.53□□□□□ -0.4
SMS-202ENST00000404933 MRPS6P82932 125 aaKnown RBP12.53□□□□□ -0.4
SMS-202ENST00000404933 SKOR1P84550 965 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 NBPF20Q3BBV1 942 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 AADACL2Q6P093 401 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 CXCL17Q6UXB2 119 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 SND1Q7KZF4 910 aaKnown RBP eCLIP12.53□□□□□ -0.4
SMS-202ENST00000404933 ADAT2Q7Z6V5 191 aaKnown RBP12.53□□□□□ -0.4
SMS-202ENST00000404933 SLC13A5Q86YT5 568 aaPredicted RBP12.53□□□□□ -0.4
SMS-202ENST00000404933 RHOT1Q8IXI2 618 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 CASKIN2Q8WXE0 1202 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 TWNKQ96RR1 684 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 NR2E1Q9Y466 385 aa12.53□□□□□ -0.4
SMS-202ENST00000404933 SCN1AP35498 2009 aa12.52□□□□□ -0.4
SMS-202ENST00000404933 TCRBV5S1A1TA0A578 114 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 ESYT3A0FGR9 886 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 GOLGA6CA6NDK9 693 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 ZSCAN5CA6NGD5 496 aaPredicted RBP12.52□□□□□ -0.41
SMS-202ENST00000404933 BHMG1C9JSJ3 638 aaPredicted RBP12.52□□□□□ -0.41
SMS-202ENST00000404933 EBAG9O00559 213 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 CD4P01730 458 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 GOLGA6DP0CG33 693 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 AKAP5P24588 427 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 CHRNA3P32297 505 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 NDST1P52848 882 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 SP3Q02447 781 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 CACNB2Q08289 660 aaPredicted RBP12.52□□□□□ -0.41
SMS-202ENST00000404933 DHX34Q14147 1143 aaKnown RBP12.52□□□□□ -0.41
SMS-202ENST00000404933 CNGA2Q16280 664 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 SGO2Q562F6 1265 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 UBXN11Q5T124 520 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 DCUN1D2Q6PH85 259 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 C3orf20Q8ND61 904 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 MAIP1Q8WWC4 291 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 HEXIM2Q96MH2 286 aaKnown RBP12.52□□□□□ -0.41
SMS-202ENST00000404933 RUNDC3BQ96NL0 473 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 APOL6Q9BWW8 343 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 NT5C1AQ9BXI3 368 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 PLEKHA4Q9H4M7 779 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 XPNPEP3Q9NQH7 507 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 GOLGA6AQ9NYA3 693 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 WDR35Q9P2L0 1181 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 TUBGCP4Q9UGJ1 667 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 HMGXB4Q9UGU5 601 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 NFU1Q9UMS0 254 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMS-202ENST00000404933 UTP11Q9Y3A2 253 aaKnown RBP12.52□□□□□ -0.41
SMS-202ENST00000404933 TRPV2Q9Y5S1 764 aa12.52□□□□□ -0.41
SMS-202ENST00000404933 FAM187AA6NFU0 413 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 KCNE1P15382 129 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 GGCXP38435 758 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 IRAK1P51617 712 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 DR1Q01658 176 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 ORC1Q13415 861 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 STILQ15468 1287 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 XKR4Q5GH76 650 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 SWT1Q5T5J6 900 aaKnown RBP12.51□□□□□ -0.41
SMS-202ENST00000404933 C9orf57Q5W0N0 161 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 B4GALNT4Q76KP1 1039 aa12.51□□□□□ -0.41
SMS-202ENST00000404933 TADA2BQ86TJ2 420 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms