RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 BPIFB1Q8TDL5 484 aa13.35□□□□□ -0.27
PRAME-204ENST00000403441 CALML4Q96GE6 196 aa13.35□□□□□ -0.27
PRAME-204ENST00000403441 ZFYVE19Q96K21 471 aa13.35□□□□□ -0.27
PRAME-204ENST00000403441 PARVGQ9HBI0 331 aa13.35□□□□□ -0.27
PRAME-204ENST00000403441 SEMA4GQ9NTN9 838 aa13.35□□□□□ -0.27
PRAME-204ENST00000403441 GTSE1Q9NYZ3 720 aa13.35□□□□□ -0.27
PRAME-204ENST00000403441 DERAQ9Y315 318 aa13.35□□□□□ -0.27
PRAME-204ENST00000403441 K7ESF4 209 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 SLC30A4O14863 429 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 HRO43593 1189 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 PPP6R2O75170 966 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 PRAMEF12O95522 483 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 CYP11A1P05108 521 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 ADRB2P07550 413 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 NFICP08651 508 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 PLCG1P19174 1290 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 WEE1P30291 646 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 HOXA6P31267 233 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 ZNF131P52739 623 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 SMARCB1Q12824 385 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 SRSF5Q13243 272 aaKnown RBP13.34□□□□□ -0.27
PRAME-204ENST00000403441 DHX8Q14562 1220 aaKnown RBP13.34□□□□□ -0.27
PRAME-204ENST00000403441 KARSQ15046 597 aaKnown RBP13.34□□□□□ -0.27
PRAME-204ENST00000403441 PON2Q15165 354 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 ITPRIPL2Q3MIP1 535 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 ATL3Q6DD88 541 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 TXNDC11Q6PKC3 985 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 PRR23CQ6ZRP0 262 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 THEM5Q8N1Q8 247 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 OR10T2Q8NGX3 314 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 C2orf15Q8WU43 125 aaKnown RBP13.34□□□□□ -0.27
PRAME-204ENST00000403441 EPSTI1Q96J88 318 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 TMEM209Q96SK2 561 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 LPIN3Q9BQK8 851 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 MKNK1Q9BUB5 465 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 ZHX3Q9H4I2 956 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 TASP1Q9H6P5 420 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 ZMYM5Q9UJ78 669 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 CPSF3Q9UKF6 684 aaKnown RBP13.34□□□□□ -0.27
PRAME-204ENST00000403441 ZDHHC9Q9Y397 364 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 TSC2P49815 1807 aa13.34□□□□□ -0.27
PRAME-204ENST00000403441 TRAK2O60296 914 aa13.33□□□□□ -0.28
PRAME-204ENST00000403441 HSP90AA1P07900 732 aaKnown RBP13.33□□□□□ -0.28
PRAME-204ENST00000403441 ADRB1P08588 477 aa13.33□□□□□ -0.28
PRAME-204ENST00000403441 CYP4F8P98187 520 aa13.33□□□□□ -0.28
PRAME-204ENST00000403441 TNK2Q07912 1038 aa13.33□□□□□ -0.28
PRAME-204ENST00000403441 CCINQ13939 588 aa13.33□□□□□ -0.28
PRAME-204ENST00000403441 PPM1JQ5JR12 505 aa13.33□□□□□ -0.28
PRAME-204ENST00000403441 FAM160A2Q8N612 972 aaPredicted RBP13.33□□□□□ -0.28
PRAME-204ENST00000403441 KRI1Q8N9T8 703 aaKnown RBP13.33□□□□□ -0.28
PRAME-204ENST00000403441 DDX1Q92499 740 aaKnown RBP13.33□□□□□ -0.28
PRAME-204ENST00000403441 RAD54LQ92698 747 aa13.33□□□□□ -0.28
PRAME-204ENST00000403441 ZNF396Q96N95 335 aaPredicted RBP13.33□□□□□ -0.28
PRAME-204ENST00000403441 CLIC6Q96NY7 704 aa13.33□□□□□ -0.28
PRAME-204ENST00000403441 LRRC3BQ96PB8 259 aa13.33□□□□□ -0.28
PRAME-204ENST00000403441 PYM1Q9BRP8 204 aaKnown RBP13.33□□□□□ -0.28
PRAME-204ENST00000403441 ZCWPW1Q9H0M4 648 aa13.33□□□□□ -0.28
PRAME-204ENST00000403441 STK17AQ9UEE5 414 aa13.33□□□□□ -0.28
PRAME-204ENST00000403441 C2CD2Q9Y426 696 aa13.33□□□□□ -0.28
PRAME-204ENST00000403441 ANO9A1A5B4 782 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 PIRO00625 290 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 CYB561D2O14569 222 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 ATF6P18850 670 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 AVPR1AP37288 418 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 TAF6P49848 677 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 CEBPZQ03701 1054 aaKnown RBP13.32□□□□□ -0.28
PRAME-204ENST00000403441 GRSF1Q12849 480 aaKnown RBP eCLIP13.32□□□□□ -0.28
PRAME-204ENST00000403441 WDR44Q5JSH3 913 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 ADALQ6DHV7 355 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 SLFN12LQ6IEE8 588 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 WDR5BQ86VZ2 330 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 SPPL2BQ8TCT7 592 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 LARP4BQ92615 738 aaKnown RBP13.32□□□□□ -0.28
PRAME-204ENST00000403441 FIZ1Q96SL8 496 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 ASB7Q9H672 318 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 ABI2Q9NYB9 513 aaPredicted RBP13.32□□□□□ -0.28
PRAME-204ENST00000403441 CHD8Q9HCK8 2581 aa13.32□□□□□ -0.28
PRAME-204ENST00000403441 KMT2BQ9UMN6 2715 aaPredicted RBP13.31□□□□□ -0.28
PRAME-204ENST00000403441 A0A087X0B3 334 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 SPTLC2O15270 562 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 ATG13O75143 517 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 DDX6P26196 483 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRAME-204ENST00000403441 DDIT3P35638 169 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 ACOT2P49753 483 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 AMPD2Q01433 879 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 BFSP1Q12934 665 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 MCM6Q14566 821 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 SV2CQ496J9 727 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 IL31Q6EBC2 164 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 SLC39A4Q6P5W5 647 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 DCP1BQ8IZD4 617 aaKnown RBP13.31□□□□□ -0.28
PRAME-204ENST00000403441 CMTM8Q8IZV2 173 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 C12orf50Q8NA57 414 aaPredicted RBP13.31□□□□□ -0.28
PRAME-204ENST00000403441 GIPC2Q8TF65 315 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 ZNF560Q96MR9 790 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 SMG9Q9H0W8 520 aaKnown RBP13.31□□□□□ -0.28
PRAME-204ENST00000403441 IL21Q9HBE4 155 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 C2orf42Q9NWW7 574 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 DPP3Q9NY33 737 aa13.31□□□□□ -0.28
PRAME-204ENST00000403441 AGO2Q9UKV8 859 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms