RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 VN1R3Q9BXE9 311 aa17.27■□□□□ 0.36
TNRC18-202ENST00000399434 NT5C1AQ9BXI3 368 aa17.27■□□□□ 0.36
TNRC18-202ENST00000399434 NAGPAQ9UK23 515 aa17.27■□□□□ 0.36
TNRC18-202ENST00000399434 ADAM28Q9UKQ2 775 aa17.27■□□□□ 0.36
TNRC18-202ENST00000399434 PCDHB8Q9UN66 801 aa17.27■□□□□ 0.36
TNRC18-202ENST00000399434 TFR2Q9UP52 801 aa17.27■□□□□ 0.36
TNRC18-202ENST00000399434 TNRC18O15417 2968 aaPredicted RBP17.26■□□□□ 0.35
TNRC18-202ENST00000399434 A8MXQ7 604 aa17.26■□□□□ 0.35
TNRC18-202ENST00000399434 FAM163BP0C2L3 166 aa17.26■□□□□ 0.35
TNRC18-202ENST00000399434 PAX3P23760 479 aa17.26■□□□□ 0.35
TNRC18-202ENST00000399434 ACAT1P24752 427 aaKnown RBP17.26■□□□□ 0.35
TNRC18-202ENST00000399434 TKTP29401 623 aaKnown RBP17.26■□□□□ 0.35
TNRC18-202ENST00000399434 BTG3Q14201 252 aaPredicted RBP17.26■□□□□ 0.35
TNRC18-202ENST00000399434 ZNF677Q86XU0 584 aa17.26■□□□□ 0.35
TNRC18-202ENST00000399434 HERC6Q8IVU3 1022 aa17.26■□□□□ 0.35
TNRC18-202ENST00000399434 REXO1L1PQ8IX06 675 aa17.26■□□□□ 0.35
TNRC18-202ENST00000399434 TMEM86AQ8N2M4 240 aa17.26■□□□□ 0.35
TNRC18-202ENST00000399434 C12orf29Q8N999 325 aa17.26■□□□□ 0.35
TNRC18-202ENST00000399434 SLC9A7Q96T83 725 aa17.26■□□□□ 0.35
TNRC18-202ENST00000399434 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.26■□□□□ 0.352e-6■□□□□ 10.6
TNRC18-202ENST00000399434 PACSIN1Q9BY11 444 aa17.26■□□□□ 0.35
TNRC18-202ENST00000399434 GPR62Q9BZJ7 368 aa17.26■□□□□ 0.35
TNRC18-202ENST00000399434 KCND1Q9NSA2 647 aa17.26■□□□□ 0.35
TNRC18-202ENST00000399434 FAN1Q9Y2M0 1017 aa17.26■□□□□ 0.35
TNRC18-202ENST00000399434 O00370 1275 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 ATP2C2O75185 946 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 CYP1A1P04798 512 aaPredicted RBP17.25■□□□□ 0.35
TNRC18-202ENST00000399434 PDGFRBP09619 1106 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 CD19P15391 556 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 TYMPP19971 482 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 TNFAIP3P21580 790 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 GNL1P36915 607 aaPredicted RBP17.25■□□□□ 0.35
TNRC18-202ENST00000399434 ARHGAP25P42331 645 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 PSMC1P62191 440 aaKnown RBP17.25■□□□□ 0.35
TNRC18-202ENST00000399434 RNF168Q8IYW5 571 aaPredicted RBP17.25■□□□□ 0.35
TNRC18-202ENST00000399434 CRYBG2Q8N1P7 616 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 OR10T2Q8NGX3 314 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 SPATA18Q8TC71 538 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 SP7Q8TDD2 431 aaPredicted RBP17.25■□□□□ 0.35
TNRC18-202ENST00000399434 YME1L1Q96TA2 773 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 COLEC11Q9BWP8 271 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 SNX25Q9H3E2 840 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 DDX43Q9NXZ2 648 aaKnown RBP17.25■□□□□ 0.35
TNRC18-202ENST00000399434 PUF60Q9UHX1 559 aaKnown RBP17.25■□□□□ 0.35
TNRC18-202ENST00000399434 SLC4A7Q9Y6M7 1214 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 PATJQ8NI35 1801 aa17.25■□□□□ 0.35
TNRC18-202ENST00000399434 TADA2AO75478 443 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 ABL1P00519 1130 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 ALDH2P05091 517 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 CCDC175P0C221 793 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 VDRP11473 427 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 NOMO3P69849 1222 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 CLEC16AQ2KHT3 1053 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 DENND1BQ6P3S1 775 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 FUT10Q6P4F1 479 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 ALKBH5Q6P6C2 394 aaKnown RBP17.24■□□□□ 0.35
TNRC18-202ENST00000399434 KCNT2Q6UVM3 1135 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 VPS36Q86VN1 386 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 PASD1Q8IV76 773 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 SLC39A11Q8N1S5 342 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 COLGALT1Q8NBJ5 622 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 PPP1R13BQ96KQ4 1090 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 B3GALT6Q96L58 329 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 PKMYT1Q99640 499 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 LACRTQ9GZZ8 138 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 CRTAC1Q9NQ79 661 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 FAM49BQ9NUQ9 324 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 SEPT11Q9NVA2 429 aaKnown RBP17.24■□□□□ 0.35
TNRC18-202ENST00000399434 PCDHGC3Q9UN70 934 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.24■□□□□ 0.35
TNRC18-202ENST00000399434 PCDHA13Q9Y5I0 950 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 LCHNA4D1U4 455 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 UNGP13051 313 aaPredicted RBP17.24■□□□□ 0.35
TNRC18-202ENST00000399434 FGFR3P22607 806 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 VAV2P52735 878 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 CCDC122Q5T0U0 273 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 B3GALNT2Q8NCR0 500 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 CYFIP2Q96F07 1278 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 IGSF21Q96ID5 467 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 HEXIM2Q96MH2 286 aaKnown RBP17.24■□□□□ 0.35
TNRC18-202ENST00000399434 TMEM209Q96SK2 561 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 SYT15Q9BQS2 421 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 TRMT1Q9NXH9 659 aaKnown RBP17.24■□□□□ 0.35
TNRC18-202ENST00000399434 TRIM10Q9UDY6 481 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 DSEQ9UL01 958 aa17.24■□□□□ 0.35
TNRC18-202ENST00000399434 TMCO5BA8MYB1 307 aa17.23■□□□□ 0.35
TNRC18-202ENST00000399434 ESPNB1AK53 854 aa17.23■□□□□ 0.35
TNRC18-202ENST00000399434 MICAL2O94851 1124 aa17.23■□□□□ 0.35
TNRC18-202ENST00000399434 CCDC130P13994 396 aa17.23■□□□□ 0.35
TNRC18-202ENST00000399434 ATP2A2P16615 1042 aaKnown RBP17.23■□□□□ 0.35
TNRC18-202ENST00000399434 LAG3P18627 525 aa17.23■□□□□ 0.35
TNRC18-202ENST00000399434 CDH5P33151 784 aaPredicted RBP17.23■□□□□ 0.35
TNRC18-202ENST00000399434 MAGEA1P43355 309 aa17.23■□□□□ 0.35
TNRC18-202ENST00000399434 LHX1P48742 406 aa17.23■□□□□ 0.35
TNRC18-202ENST00000399434 SPA17Q15506 151 aa17.23■□□□□ 0.35
TNRC18-202ENST00000399434 SGO2Q562F6 1265 aa17.23■□□□□ 0.35
TNRC18-202ENST00000399434 PPP1R26Q5T8A7 1209 aaPredicted RBP17.23■□□□□ 0.35
TNRC18-202ENST00000399434 NAA35Q5VZE5 725 aa17.23■□□□□ 0.35
TNRC18-202ENST00000399434 ARHGAP17Q68EM7 881 aa17.23■□□□□ 0.35
TNRC18-202ENST00000399434 FAM109BQ6ICB4 259 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms