RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 FHOD1Q9Y613 1164 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 C1orf167Q5SNV9 1468 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 ZC3H4Q9UPT8 1303 aaKnown RBP8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 SUPT3HB4E1H0 165 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 CFAP99D6REC4 459 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 RGL2O15211 777 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 AKAP10O43572 662 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 GYPCP04921 128 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 TXNP10599 105 aaKnown RBP8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 COMTP21964 271 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 ATICP31939 592 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 FBXW4P57775 412 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 E2F4Q16254 413 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 SLC44A5Q8NCS7 719 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 CPA5Q8WXQ8 436 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 JADE3Q92613 823 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 CAVIN3Q969G5 261 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 RAB6BQ9NRW1 208 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 DRG1Q9Y295 367 aaKnown RBP8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 ZNF185O15231 689 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 FBXO21O94952 628 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 EGFRP00533 1210 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 FCGR1AP12314 374 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 ITGA4P13612 1032 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 HIST2H2ACQ16777 129 aaPredicted RBP8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 TMEM259Q4ZIN3 620 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 HIST2H2AA3Q6FI13 130 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 NOTUMQ6P988 496 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 FBXO33Q7Z6M2 555 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 THAP11Q96EK4 314 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 C17orf80Q9BSJ5 609 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 C10orf88Q9H8K7 445 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 SLC30A1Q9Y6M5 507 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 NWD1Q149M9 1564 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 DIP2BQ9P265 1576 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 DIP2CQ9Y2E4 1556 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 ODC1P11926 461 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 COPAP53621 1224 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 PRKCEQ02156 737 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 LAMC2Q13753 1193 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 ZNF484Q5JVG2 852 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 AGAP9Q5VTM2 703 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 GMCL1P1Q8NEA9 526 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 TMC2Q8TDI7 906 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 ANKS1AQ92625 1134 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 ZIM3Q96PE6 472 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 CDK5RAP1Q96SZ6 601 aaKnown RBP8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 NAT9Q9BTE0 207 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 PCMTD2Q9NV79 361 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 CD274Q9NZQ7 290 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 EIF3LQ9Y262 564 aaKnown RBP8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 TMEM120BA0PK00 339 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 CORO7P57737 925 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 FAM83EQ2M2I3 478 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 PRMT9Q6P2P2 845 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 RBM43Q6ZSC3 357 aaKnown RBP8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 BARGINQ6ZT62 677 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 UNC45BQ8IWX7 931 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 EME1Q96AY2 570 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 MS4A14Q96JA4 679 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 TMBIM4Q9HC24 238 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 SLC24A2Q9UI40 661 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 DSEQ9UL01 958 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 AP4S1Q9Y587 144 aa8.72□□□□□ -1.01
SPTLC3-201ENST00000399002 TIMM44O43615 452 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 TGM2P21980 687 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 PPP4CP60510 307 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 SKOR1P84550 965 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 EIF2B5Q13144 721 aaKnown RBP8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 CUL2Q13617 745 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 C11orf63Q6NUN7 778 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 PRPF39Q86UA1 669 aaKnown RBP8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 SNX31Q8N9S9 440 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 MRPL48Q96GC5 212 aaKnown RBP8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 CNBD2Q96M20 576 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 ADNPQ9H2P0 1102 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 PIK3C2BO00750 1634 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 WDR47O94967 919 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 MPOP05164 745 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 THRAP10827 490 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 MTMR2Q13614 643 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 DMC1Q14565 340 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 TTLL9Q3SXZ7 439 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 SLC13A5Q86YT5 568 aaPredicted RBP8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 ERAP1Q9NZ08 941 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 TBX20Q9UMR3 447 aa8.71□□□□□ -1.01
SPTLC3-201ENST00000399002 SPATA31A6Q5VVP1 1343 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 CAMTA2O94983 1202 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 PSMA4P25789 261 aaKnown RBP8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 RUNX1T1Q06455 604 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 ACTN3Q08043 901 aaPredicted RBP8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 CSTF3Q12996 717 aaKnown RBP8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 SPP2Q13103 211 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 ARHGEF7Q14155 803 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 MTF1Q14872 753 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 WDR72Q3MJ13 1102 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 PAPD7Q5XG87 772 aaKnown RBP8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 CATSPER3Q86XQ3 398 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 PPP2R3CQ969Q6 453 aa8.71□□□□□ -1.02
SPTLC3-201ENST00000399002 BRD8Q9H0E9 1235 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms