RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 DRD1P21728 446 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 MUTP22033 750 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 U2AF2P26368 475 aaKnown RBP eCLIP10.28□□□□□ -0.765e-7■■□□□ 13.9
NEDD9-203ENST00000397378 RPA1P27694 616 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 MCM2P49736 904 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 AMPD2Q01433 879 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 GFPT1Q06210 699 aaPredicted RBP10.28□□□□□ -0.76
NEDD9-203ENST00000397378 RUNX3Q13761 415 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 FBXO43Q4G163 708 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 GPR158Q5T848 1215 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 TMC8Q8IU68 726 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 SCUBE3Q8IX30 993 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 TMEFF1Q8IYR6 380 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 MINDY1Q8N5J2 469 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 CEP120Q8N960 986 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 SPRYD3Q8NCJ5 442 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 APPL2Q8NEU8 664 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 OR2I1PQ8NGU4 316 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 KIFAP3Q92845 792 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 ZMAT2Q96NC0 199 aaKnown RBP10.28□□□□□ -0.76
NEDD9-203ENST00000397378 KIFC3Q9BVG8 833 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 CDT1Q9H211 546 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 ATXN3LQ9H3M9 355 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 EBF3Q9H4W6 596 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 FBRSL1Q9HCM7 1045 aaKnown RBP10.28□□□□□ -0.76
NEDD9-203ENST00000397378 PTPRHQ9HD43 1115 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 GKN1Q9NS71 199 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 OBP2AQ9NY56 170 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 ORC3Q9UBD5 711 aaPredicted RBP10.28□□□□□ -0.76
NEDD9-203ENST00000397378 DKK4Q9UBT3 224 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 APOBEC2Q9Y235 224 aaKnown RBP10.28□□□□□ -0.76
NEDD9-203ENST00000397378 YIPF1Q9Y548 306 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 PI4KAP42356 2102 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 OBSL1O75147 1896 aa10.27□□□□□ -0.76
NEDD9-203ENST00000397378 UNC79Q9P2D8 2635 aa10.27□□□□□ -0.76
NEDD9-203ENST00000397378 SH3BP5O60239 455 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 CTDNEP1O95476 244 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 PRAMEF12O95522 483 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 CD59P13987 128 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 DPP6P42658 865 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 PTGER3P43115 390 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 GALK1P51570 392 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 PLD1Q13393 1074 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 ARHGAP15Q53QZ3 475 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 LYSMD4Q5XG99 296 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 TRIM68Q6AZZ1 485 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 RNF19BQ6ZMZ0 732 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 TOGARAM2Q6ZUX3 1019 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 MDGA1Q8NFP4 955 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 DDX12PQ92771 950 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 EXOC4Q96A65 974 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 CHFRQ96EP1 664 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 SPACA7Q96KW9 195 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 TBC1D32Q96NH3 1257 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 ACAP3Q96P50 834 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 ACO2Q99798 780 aaKnown RBP10.27□□□□□ -0.77
NEDD9-203ENST00000397378 OXCT2Q9BYC2 517 aaPredicted RBP10.27□□□□□ -0.77
NEDD9-203ENST00000397378 TMEM60Q9H2L4 133 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 TMEM134Q9H6X4 195 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 PDRG1Q9NUG6 133 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 CNTN3Q9P232 1028 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 SLC6A14Q9UN76 642 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 MYO18BQ8IUG5 2567 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 PHLPP2Q6ZVD8 1323 aa10.27□□□□□ -0.77
NEDD9-203ENST00000397378 HECTD1Q9ULT8 2610 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 ZNF462Q96JM2 2506 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.26□□□□□ -0.77
NEDD9-203ENST00000397378 OTOL1A6NHN0 477 aaPredicted RBP10.26□□□□□ -0.77
NEDD9-203ENST00000397378 BTBD18B2RXH4 712 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 PYCARD-AS1I3L0S3 204 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 OAZ2O95190 189 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 VNN2O95498 520 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 MCF2P10911 925 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 FDPSP14324 419 aaKnown RBP10.26□□□□□ -0.77
NEDD9-203ENST00000397378 PROZP22891 400 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 GABRR2P28476 465 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 WEE1P30291 646 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 MCM4P33991 863 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 CFHR1Q03591 330 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 KCNC4Q03721 635 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 DUOXA1Q1HG43 343 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 ZNF568Q3ZCX4 644 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 LMBRD2Q68DH5 695 aaPredicted RBP10.26□□□□□ -0.77
NEDD9-203ENST00000397378 NAIF1Q69YI7 327 aaPredicted RBP10.26□□□□□ -0.77
NEDD9-203ENST00000397378 RASSF3Q86WH2 238 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 LSM14AQ8ND56 463 aaKnown RBP10.26□□□□□ -0.77
NEDD9-203ENST00000397378 ERMNQ8TAM6 284 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 RLN3Q8WXF3 142 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 C18orf25Q96B23 403 aaPredicted RBP10.26□□□□□ -0.77
NEDD9-203ENST00000397378 CNOT6LQ96LI5 555 aaKnown RBP10.26□□□□□ -0.77
NEDD9-203ENST00000397378 P2RY13Q9BPV8 354 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 SMG9Q9H0W8 520 aaKnown RBP10.26□□□□□ -0.77
NEDD9-203ENST00000397378 DNAJC25Q9H1X3 360 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 POLMQ9NP87 494 aaPredicted RBP10.26□□□□□ -0.77
NEDD9-203ENST00000397378 HPS4Q9NQG7 708 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 ASB3Q9Y575 518 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 TCHHQ07283 1943 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 TSC2P49815 1807 aa10.26□□□□□ -0.77
NEDD9-203ENST00000397378 TRABD2BA6NFA1 517 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms