RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 F8VZ95 297 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 TMEM189-UBE2V1I3L0A0 370 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 GJB5O95377 273 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 PRLRP16471 622 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 KIF11P52732 1056 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 ITIH3Q06033 890 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 DRAP1Q14919 205 aaPredicted RBP15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 HSP90B2PQ58FF3 399 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 SFMBT2Q5VUG0 894 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 CMTR2Q8IYT2 770 aaKnown RBP15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 UBR7Q8N806 425 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 C3orf58Q8NDZ4 430 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 PHOSPHO2Q8TCD6 241 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 SHC3Q92529 594 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 SPAG5Q96R06 1193 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 FAM124BQ9H5Z6 455 aaPredicted RBP15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 SNX12Q9UMY4 172 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 FAN1Q9Y2M0 1017 aa15.82■□□□□ 0.12
TM9SF1-202ENST00000396854 KPNA7A9QM74 516 aa15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 PDE2AO00408 941 aaPredicted RBP15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 SPTLC1O15269 473 aa15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 TACC1O75410 805 aa15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 CLSTN1O94985 981 aa15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 MAGEA10P43363 369 aaPredicted RBP15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 TNNC1P63316 161 aa15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 HTRA4P83105 476 aaPredicted RBP15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 HGSNATQ68CP4 663 aa15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 DCLRE1AQ6PJP8 1040 aa15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 TMCO2Q7Z6W1 182 aaPredicted RBP15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 AIPL1Q9NZN9 384 aa15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 NXF1Q9UBU9 619 aaKnown RBP15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 DNAJB4Q9UDY4 337 aa15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 POLIQ9UNA4 740 aa15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 GBF1Q92538 1859 aa15.81■□□□□ 0.12
TM9SF1-202ENST00000396854 EIF4A3P38919 411 aaKnown RBP15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 LMAN1P49257 510 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 ARHGAP44Q17R89 818 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 PAN2Q504Q3 1202 aaKnown RBP15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 CD300LGQ6UXG3 332 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 FMNL3Q8IVF7 1028 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 RUBCNQ92622 972 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 CYP3A43Q9HB55 503 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 SNX9Q9Y5X1 595 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 SLC4A7Q9Y6M7 1214 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 NLRC5Q86WI3 1866 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 ZNF185O15231 689 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 PJA2O43164 708 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 B3GAT3O94766 335 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 SERPING1P05155 500 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 ACO1P21399 889 aaKnown RBP15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 SOX5P35711 763 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 STAT1P42224 750 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 LIMS2Q7Z4I7 341 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 CWH43Q9H720 699 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 HCSTQ9UBK5 93 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 CNTN6Q9UQ52 1028 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 CAPN6Q9Y6Q1 641 aa15.8■□□□□ 0.12
TM9SF1-202ENST00000396854 FOXN3O00409 490 aaPredicted RBP15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 KIF4AO95239 1232 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 IGFBP6P24592 240 aaPredicted RBP15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 OR1G1P47890 313 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 YWHAEP62258 255 aaKnown RBP15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 ASIC2Q16515 512 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 ZSCAN26Q16670 478 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 ASTE1Q2TB18 679 aaPredicted RBP15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 FAM117BQ6P1L5 589 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 SCARA5Q6ZMJ2 495 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 DPH6Q7L8W6 267 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 CREG2Q8IUH2 290 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 FAM71AQ8IYT1 594 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 MMGT1Q8N4V1 131 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 SDCBP2Q9H190 292 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 DEF6Q9H4E7 631 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 SMYD3Q9H7B4 428 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 HPCAL4Q9UM19 191 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 VWA8A3KMH1 1905 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 ACTN2P35609 894 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 INCA1Q0VD86 236 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 HERC6Q8IVU3 1022 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 TTC39CQ8N584 583 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 TOP6BLQ8N6T0 577 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 COG1Q8WTW3 980 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 ALS2CR12Q96Q35 445 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 YME1L1Q96TA2 773 aa15.79■□□□□ 0.12
TM9SF1-202ENST00000396854 NRP1O14786 923 aa15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 AKR1B10O60218 316 aa15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 ALDH2P05091 517 aa15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 GALTP07902 379 aa15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 WEE2P0C1S8 567 aa15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 FAM163BP0C2L3 166 aa15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 ATP2A2P16615 1042 aaKnown RBP15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 SLC11A1P49279 550 aa15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 BTG3Q14201 252 aaPredicted RBP15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 SOWAHAQ2M3V2 549 aa15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 CCDC70Q6NSX1 233 aa15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 CCNI2Q6ZMN8 369 aaPredicted RBP15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 CISHQ9NSE2 258 aa15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 MARCH5Q9NX47 278 aa15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 INSL6Q9Y581 213 aa15.78■□□□□ 0.12
TM9SF1-202ENST00000396854 MYH10P35580 1976 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms