RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 PACSIN2Q9UNF0 486 aaPredicted RBP16.09■□□□□ 0.17
SCAF11-204ENST00000395454 LACTBL1A8MY62 500 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 MEFVO15553 781 aaPredicted RBP16.09■□□□□ 0.17
SCAF11-204ENST00000395454 CYP1A1P04798 512 aaPredicted RBP16.09■□□□□ 0.17
SCAF11-204ENST00000395454 RHOXF2BP0C7M4 288 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 KRT5P13647 590 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 AFF1P51825 1210 aaKnown RBP16.09■□□□□ 0.17
SCAF11-204ENST00000395454 C9orf50Q5SZB4 431 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 GLB1LQ6UWU2 654 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 TRIM72Q6ZMU5 477 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 DAAM2Q86T65 1068 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 CRIPAKQ8N1N5 446 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 TAF4BQ92750 862 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 PSMB7Q99436 277 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 RHOXF2Q9BQY4 288 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 IMPG2Q9BZV3 1241 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 XYLT2Q9H1B5 865 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 GOLPH3Q9H4A6 298 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 SLC4A7Q9Y6M7 1214 aa16.09■□□□□ 0.17
SCAF11-204ENST00000395454 CENPCQ03188 943 aa16.08■□□□□ 0.16
SCAF11-204ENST00000395454 C2orf54Q08AI8 447 aa16.08■□□□□ 0.16
SCAF11-204ENST00000395454 SGSM1Q2NKQ1 1148 aa16.08■□□□□ 0.16
SCAF11-204ENST00000395454 GLE1Q53GS7 698 aaKnown RBP16.08■□□□□ 0.16
SCAF11-204ENST00000395454 CLLU1OSQ5K130 101 aa16.08■□□□□ 0.16
SCAF11-204ENST00000395454 BEND6Q5SZJ8 279 aaPredicted RBP16.08■□□□□ 0.16
SCAF11-204ENST00000395454 TAF3Q5VWG9 929 aa16.08■□□□□ 0.16
SCAF11-204ENST00000395454 ELMO3Q96BJ8 720 aa16.08■□□□□ 0.16
SCAF11-204ENST00000395454 NIF3L1Q9GZT8 377 aa16.08■□□□□ 0.16
SCAF11-204ENST00000395454 PLEKHA5Q9HAU0 1116 aa16.08■□□□□ 0.16
SCAF11-204ENST00000395454 AVENQ9NQS1 362 aaPredicted RBP16.08■□□□□ 0.16
SCAF11-204ENST00000395454 UVRAGQ9P2Y5 699 aa16.08■□□□□ 0.16
SCAF11-204ENST00000395454 HOXA2O43364 376 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 PHACTR2O75167 634 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 ERLIN1O75477 346 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 CST3P01034 146 aaPredicted RBP16.07■□□□□ 0.16
SCAF11-204ENST00000395454 POMCP01189 267 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 SCNN1GP51170 649 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 PPP1R2P3Q6NXS1 205 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 ALKAL1Q6UXT8 129 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 CXorf38Q8TB03 319 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 KIF12Q96FN5 646 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 MS4A14Q96JA4 679 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 RNPC3Q96LT9 517 aaKnown RBP16.07■□□□□ 0.16
SCAF11-204ENST00000395454 GDF15Q99988 308 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 ASB7Q9H672 318 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 RBM12Q9NTZ6 932 aaKnown RBP16.07■□□□□ 0.16
SCAF11-204ENST00000395454 CNTN3Q9P232 1028 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 AMFRQ9UKV5 643 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 PTPRSQ13332 1948 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 KCNK3O14649 394 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 DDX3YO15523 660 aaKnown RBP16.07■□□□□ 0.16
SCAF11-204ENST00000395454 NFICP08651 508 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 MYBL1P10243 752 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 GATMP50440 423 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 SHHQ15465 462 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 JADE1Q6IE81 842 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 CD302Q8IX05 232 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 GSTCDQ8NEC7 633 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 ZMAT2Q96NC0 199 aaKnown RBP16.07■□□□□ 0.16
SCAF11-204ENST00000395454 CARD9Q9H257 536 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 VRTNQ9H8Y1 702 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 EHD2Q9NZN4 543 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 OGFRQ9NZT2 677 aa16.07■□□□□ 0.16
SCAF11-204ENST00000395454 SMIM28A0A1B0GU29 152 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 MIF4GDA9UHW6 222 aaKnown RBP16.06■□□□□ 0.16
SCAF11-204ENST00000395454 PTGESO14684 152 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 DGKIO75912 1065 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 ATP2A2P16615 1042 aaKnown RBP16.06■□□□□ 0.16
SCAF11-204ENST00000395454 TNFRSF8P28908 595 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 MYL6P60660 151 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 TFAMQ00059 246 aaKnown RBP16.06■□□□□ 0.16
SCAF11-204ENST00000395454 LONRF2Q1L5Z9 754 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 SCARA3Q6AZY7 606 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 CCDC70Q6NSX1 233 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 RBBP8NLQ8NC74 664 aaPredicted RBP16.06■□□□□ 0.16
SCAF11-204ENST00000395454 TRIM11Q96F44 468 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 ZBED2Q9BTP6 218 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 FUT8Q9BYC5 575 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 SMARCAL1Q9NZC9 954 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 L1RE1Q9UN81 338 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 PDCD11Q14690 1871 aaKnown RBP16.06■□□□□ 0.16
SCAF11-204ENST00000395454 TDRD15B5MCY1 1934 aaKnown RBP16.06■□□□□ 0.16
SCAF11-204ENST00000395454 TBKBP1A7MCY6 615 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 MAP2K7O14733 419 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 TNNC2P02585 160 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 THP07101 528 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 TMEM191BP0C7N4 346 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 TMEM132DQ14C87 1099 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 PAN2Q504Q3 1202 aaKnown RBP16.06■□□□□ 0.16
SCAF11-204ENST00000395454 XKR4Q5GH76 650 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 NOMO2Q5JPE7 1267 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 NT5DC4Q86YG4 428 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 URGCPQ8TCY9 931 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 CD101Q93033 1021 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 ANKRD36BP1Q96IX9 119 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 VCPIP1Q96JH7 1222 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 SLC9A7Q96T83 725 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 YME1L1Q96TA2 773 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 SELENOOQ9BVL4 669 aa16.06■□□□□ 0.16
SCAF11-204ENST00000395454 MIOSQ9NXC5 875 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms