RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 C19orf81C9J6K1 198 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 ABLIM1O14639 778 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 GJB6O95452 261 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 STX2P32856 288 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 RCN2Q14257 317 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 PWWP2AQ96N64 755 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 RHBDL2Q9NX52 303 aa16.41■□□□□ 0.22
PTBP1-204ENST00000394601 MTRF1LQ9UGC7 380 aaKnown RBP16.41■□□□□ 0.22
PTBP1-204ENST00000394601 RASGRF2O14827 1237 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 KLRC2P26717 231 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 CCDC142Q17RM4 750 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 TRMT10CQ7L0Y3 403 aaKnown RBP16.4■□□□□ 0.22
PTBP1-204ENST00000394601 ERP27Q96DN0 273 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 R3HDMLQ9H3Y0 253 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 ZNF302Q9NR11 478 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 EURLQ9NYK6 297 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 RBAKQ9NYW8 714 aaPredicted RBP16.4■□□□□ 0.22
PTBP1-204ENST00000394601 SLC12A4Q9UP95 1085 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 TMEM120BA0PK00 339 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 CST3P01034 146 aaPredicted RBP16.4■□□□□ 0.22
PTBP1-204ENST00000394601 RALAP11233 206 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 TNNI1P19237 187 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 ITIH2P19823 946 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 PIK3CAP42336 1068 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 CAPSQ13938 189 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 LRRC23Q53EV4 343 aaPredicted RBP16.4■□□□□ 0.22
PTBP1-204ENST00000394601 ANGEL2Q5VTE6 544 aaKnown RBP16.4■□□□□ 0.22
PTBP1-204ENST00000394601 DCAF15Q66K64 600 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 ANO7Q6IWH7 933 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 PASD1Q8IV76 773 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 KATNAL2Q8IYT4 538 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 MAGEC3Q8TD91 643 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 CGRRF1Q99675 332 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 KLHL14Q9P2G3 628 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 H0YCG3 227 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 PSTPIP1O43586 416 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 CETPP11597 493 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 EDNRBP24530 442 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 SERPINB4P48594 390 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 POLGP54098 1239 aaPredicted RBP16.4■□□□□ 0.22
PTBP1-204ENST00000394601 CNGA2Q16280 664 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 SEZ6Q53EL9 994 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 NOL9Q5SY16 702 aaKnown RBP16.4■□□□□ 0.22
PTBP1-204ENST00000394601 TRPM4Q8TD43 1214 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 VCPIP1Q96JH7 1222 aa16.4■□□□□ 0.22
PTBP1-204ENST00000394601 CFAP73A6NFT4 308 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 SNX3O60493 162 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 FARP2O94887 1054 aaPredicted RBP16.39■□□□□ 0.21
PTBP1-204ENST00000394601 GHRP10912 638 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 ABCD1P33897 745 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 ITGA8P53708 1063 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 SH3D19Q5HYK7 790 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 TMEM270Q6UE05 265 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 VSTM1Q6UX27 236 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 CCNJLQ8IV13 435 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 CCHCR1Q8TD31 782 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 LTBP3Q9NS15 1303 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 ZBTB42B2RXF5 422 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 CBX6O95503 412 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 UBA1P22314 1058 aaKnown RBP16.39■□□□□ 0.21
PTBP1-204ENST00000394601 TNFSF9P41273 254 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 NSFP46459 744 aaKnown RBP16.39■□□□□ 0.21
PTBP1-204ENST00000394601 TMEM63BQ5T3F8 832 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 SRRM1Q8IYB3 904 aaKnown RBP16.39■□□□□ 0.21
PTBP1-204ENST00000394601 DNERQ8NFT8 737 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 TRIM11Q96F44 468 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 SNF8Q96H20 258 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 C11orf70Q9BRQ4 267 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 ROPN1BQ9BZX4 212 aaPredicted RBP16.39■□□□□ 0.21
PTBP1-204ENST00000394601 TMEM134Q9H6X4 195 aa16.39■□□□□ 0.21
PTBP1-204ENST00000394601 ROPN1Q9HAT0 212 aaPredicted RBP16.39■□□□□ 0.21
PTBP1-204ENST00000394601 WDR91A4D1P6 747 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 MSCO60682 206 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 TCEA3O75764 348 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 LUC7L3O95232 432 aaKnown RBP16.38■□□□□ 0.21
PTBP1-204ENST00000394601 EPHB2P29323 1055 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 GNA15P30679 374 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 RPL7AP62424 266 aaKnown RBP16.38■□□□□ 0.21
PTBP1-204ENST00000394601 ZNF268Q14587 947 aaPredicted RBP16.38■□□□□ 0.21
PTBP1-204ENST00000394601 SYDE1Q6ZW31 735 aaPredicted RBP16.38■□□□□ 0.21
PTBP1-204ENST00000394601 PRUNE1Q86TP1 453 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 TRIM74Q86UV6 250 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 TRIM73Q86UV7 250 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 RELL1Q8IUW5 271 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 WDTC1Q8N5D0 677 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 FAM118BQ9BPY3 351 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 SPAG7O75391 227 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 MMP8P22894 467 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 HIRAP54198 1017 aaPredicted RBP16.38■□□□□ 0.21
PTBP1-204ENST00000394601 BPIFB4P59827 614 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 NOP14P78316 857 aaKnown RBP16.38■□□□□ 0.21
PTBP1-204ENST00000394601 MPP2Q14168 576 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 WDR44Q5JSH3 913 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 TREML2Q5T2D2 321 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 RBBP8NLQ8NC74 664 aaPredicted RBP16.38■□□□□ 0.21
PTBP1-204ENST00000394601 FNBP1Q96RU3 617 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 HEMGNQ9BXL5 484 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 TTC4O95801 387 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 OGDHQ02218 1023 aa16.38■□□□□ 0.21
PTBP1-204ENST00000394601 C1QBPQ07021 282 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms