RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 MCCD1P59942 119 aaPredicted RBP9.18□□□□□ -0.94
APLF-202ENST00000394342 LRRC63Q05C16 580 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 ADAM9Q13443 819 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 TRPC3Q13507 836 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 TDRD10Q5VZ19 366 aaKnown RBP9.18□□□□□ -0.94
APLF-202ENST00000394342 SCARA3Q6AZY7 606 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 GRASPQ7Z6J2 395 aaPredicted RBP9.18□□□□□ -0.94
APLF-202ENST00000394342 FAM186BQ8IYM0 893 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 DCP1BQ8IZD4 617 aaKnown RBP9.18□□□□□ -0.94
APLF-202ENST00000394342 ADGRF2Q8IZF7 708 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 ADSSL1Q8N142 457 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 ERCC4Q92889 916 aaPredicted RBP9.18□□□□□ -0.94
APLF-202ENST00000394342 SYAP1Q96A49 352 aaPredicted RBP9.18□□□□□ -0.94
APLF-202ENST00000394342 IPO9Q96P70 1041 aaKnown RBP9.18□□□□□ -0.94
APLF-202ENST00000394342 ACBD6Q9BR61 282 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 MKNK1Q9BUB5 465 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 C1QTNF1Q9BXJ1 281 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 VRTNQ9H8Y1 702 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.18□□□□□ -0.94
APLF-202ENST00000394342 EPS15L1Q9UBC2 864 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 MUTYHQ9UIF7 546 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 MAN1B1Q9UKM7 699 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 POLIQ9UNA4 740 aa9.18□□□□□ -0.94
APLF-202ENST00000394342 MYO18AQ92614 2054 aaKnown RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 GABRDO14764 452 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 PSMA7O14818 248 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 N4BP1O75113 896 aaKnown RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 PHACTR2O75167 634 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 AKAP3O75969 853 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 CST3P01034 146 aaPredicted RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 FAM163BP0C2L3 166 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 EPB41P11171 864 aaKnown RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 KRT13P13646 458 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 WARSP23381 471 aaKnown RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 PCSK1P29120 753 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 GBP2P32456 591 aaPredicted RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 TUFMP49411 452 aaKnown RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 VAMP7P51809 220 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 TNNC1P63316 161 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 TWF1Q12792 350 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 DUSP4Q13115 394 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 BIRC3Q13489 604 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 NCOA4Q13772 614 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 MORC3Q14149 939 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 NFE2Q16621 373 aaPredicted RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 PTPN21Q16825 1174 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 SOWAHAQ2M3V2 549 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 ZACNQ401N2 412 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 PABPC1LQ4VXU2 614 aaKnown RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 SLC39A12Q504Y0 691 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 GET4Q7L5D6 327 aaPredicted RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 ZC3H3Q8IXZ2 948 aaKnown RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 LEMD2Q8NC56 503 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 SPPL2BQ8TCT7 592 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 NXPE3Q969Y0 559 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 DHTKD1Q96HY7 919 aaPredicted RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 ZNF512Q96ME7 567 aaPredicted RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 PGLYRP2Q96PD5 576 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 MYADMQ96S97 322 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 TMEM209Q96SK2 561 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 EPHX3Q9H6B9 360 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 SCUBE2Q9NQ36 999 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 HCFC1R1Q9NWW0 138 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 DDX43Q9NXZ2 648 aaKnown RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 IGSF9Q9P2J2 1179 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 DNMT3BQ9UBC3 853 aaKnown RBP9.17□□□□□ -0.94
APLF-202ENST00000394342 YIPF1Q9Y548 306 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 ASB3Q9Y575 518 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 MUC6Q6W4X9 2439 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 CACNA1IQ9P0X4 2223 aa9.17□□□□□ -0.94
APLF-202ENST00000394342 CACNA1HO95180 2353 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 ZNF197O14709 1029 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 SLC16A3O15427 465 aaKnown RBP9.16□□□□□ -0.94
APLF-202ENST00000394342 STX10O60499 249 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 GPR37L1O60883 481 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 TACC1O75410 805 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 MICAL2O94851 1124 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 VNN1O95497 513 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 RHOP08100 348 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 CCNE1P24864 410 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 GTF2H1P32780 548 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 ALDH1A3P47895 512 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 EPHB3P54753 998 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 EPHA5P54756 1037 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 MYL6P60660 151 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 DLG4P78352 724 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 NTHL1P78549 312 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 ZXDAP98168 799 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 FKBP3Q00688 224 aaKnown RBP9.16□□□□□ -0.94
APLF-202ENST00000394342 SGSM1Q2NKQ1 1148 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 ZNF699Q32M78 642 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 WDR72Q3MJ13 1102 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 INTS6LQ5JSJ4 861 aaKnown RBP9.16□□□□□ -0.94
APLF-202ENST00000394342 C1orf220Q5T0J3 134 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 ANKRD40Q6AI12 368 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 IQCEQ6IPM2 695 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 FOXR2Q6PJQ5 311 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 PDZD4Q76G19 769 aaPredicted RBP9.16□□□□□ -0.94
APLF-202ENST00000394342 SV2AQ7L0J3 742 aa9.16□□□□□ -0.94
APLF-202ENST00000394342 LRRTM3Q86VH5 581 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms