RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 EMC1Q8N766 993 aa15.96■□□□□ 0.15
GPC3-202ENST00000394299 UHMK1Q8TAS1 419 aaKnown RBP15.96■□□□□ 0.15
GPC3-202ENST00000394299 HEXIM2Q96MH2 286 aaKnown RBP15.96■□□□□ 0.15
GPC3-202ENST00000394299 TREHO43280 583 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 CILPO75339 1184 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 LSM8O95777 96 aaKnown RBP15.95■□□□□ 0.14
GPC3-202ENST00000394299 CALB1P05937 261 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 CYP2C9P11712 490 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 PSMC4P43686 418 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 VPS41P49754 854 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 ZNF844Q08AG5 666 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 PPP1R7Q15435 360 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 PPP1R15BQ5SWA1 713 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 C12orf29Q8N999 325 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 C18orf25Q96B23 403 aaPredicted RBP15.95■□□□□ 0.14
GPC3-202ENST00000394299 TMEM176AQ96HP8 235 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 ADPGKQ9BRR6 497 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 TXLNGYQ9BZA5 131 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 OSBPL8Q9BZF1 889 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 DCLK3Q9C098 648 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 EPB41L4BQ9H329 900 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 IP6K2Q9UHH9 426 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 RASAL2Q9UJF2 1139 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 GJD2Q9UKL4 321 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 SHBGP04278 402 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 AKAP5P24588 427 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 CDH5P33151 784 aaPredicted RBP15.95■□□□□ 0.14
GPC3-202ENST00000394299 KRT17Q04695 432 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 PTPN11Q06124 597 aaPredicted RBP15.95■□□□□ 0.14
GPC3-202ENST00000394299 KLF1Q13351 362 aaPredicted RBP15.95■□□□□ 0.14
GPC3-202ENST00000394299 FOXR1Q6PIV2 292 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 RASAL3Q86YV0 1011 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 LPIN3Q9BQK8 851 aa15.95■□□□□ 0.14
GPC3-202ENST00000394299 BCCIPQ9P287 314 aaKnown RBP eCLIP15.95■□□□□ 0.14
GPC3-202ENST00000394299 PODXLO00592 558 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 TP73O15350 636 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 MICAL2O94851 1124 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 ECEL1O95672 775 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 ERBB2P04626 1255 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 MYL3P08590 195 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 CYP3A5P20815 502 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 CDR1P51861 262 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 NDST1P52848 882 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 DRG2P55039 364 aaKnown RBP15.94■□□□□ 0.14
GPC3-202ENST00000394299 MFSD7Q6UXD7 560 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 CD302Q8IX05 232 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 ARFGAP1Q8N6T3 406 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 C12orf50Q8NA57 414 aaPredicted RBP15.94■□□□□ 0.14
GPC3-202ENST00000394299 RAPGEF5Q92565 580 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 PWWP2AQ96N64 755 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 PLVAPQ9BX97 442 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 SEMA4AQ9H3S1 761 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 NXF3Q9H4D5 531 aaKnown RBP15.94■□□□□ 0.14
GPC3-202ENST00000394299 TUBGCP4Q9UGJ1 667 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 PSTPIP1O43586 416 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 HCRTO43612 131 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 PPFIA2O75334 1257 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 F2P00734 622 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 FNTAP49354 379 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 HNRNPH2P55795 449 aaKnown RBP15.94■□□□□ 0.14
GPC3-202ENST00000394299 PSMC1P62191 440 aaKnown RBP15.94■□□□□ 0.14
GPC3-202ENST00000394299 MFSD10Q14728 455 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 KCNT1Q5JUK3 1230 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 ZNF410Q86VK4 478 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 KATNAL2Q8IYT4 538 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 ZNF518BQ9C0D4 1074 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 TMBIM4Q9HC24 238 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 DNAJC17Q9NVM6 304 aaKnown RBP15.94■□□□□ 0.14
GPC3-202ENST00000394299 KLK14Q9P0G3 267 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 CEP83Q9Y592 693 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 TRIP11Q15643 1979 aa15.94■□□□□ 0.14
GPC3-202ENST00000394299 ATF7P17544 494 aaPredicted RBP15.93■□□□□ 0.14
GPC3-202ENST00000394299 CTGFP29279 349 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 GRM5P41594 1212 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 YWHAEP62258 255 aaKnown RBP15.93■□□□□ 0.14
GPC3-202ENST00000394299 SMTNL2Q2TAL5 461 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 LRRC31Q6UY01 552 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 C3orf20Q8ND61 904 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 CCDC114Q96M63 670 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 GCOM2Q9BZD3 368 aaPredicted RBP15.93■□□□□ 0.14
GPC3-202ENST00000394299 RNF39Q9H2S5 420 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 NME7Q9Y5B8 376 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 RRN3P2A6NIE6 340 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 DCDC2CA8MYV0 355 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 M0QYV0 167 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 KRT3P12035 628 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 ACTN2P35609 894 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 PMS2P54278 862 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 RBP5P82980 135 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 NFX1Q12986 1120 aaKnown RBP15.93■□□□□ 0.14
GPC3-202ENST00000394299 RAB6CQ53S08 254 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 CCDC25Q86WR0 208 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 HAUS1Q96CS2 278 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 MRPL45Q9BRJ2 306 aaKnown RBP15.93■□□□□ 0.14
GPC3-202ENST00000394299 RAB6CQ9H0N0 254 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 SLC5A4Q9NY91 659 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 NRCAMQ92823 1304 aa15.93■□□□□ 0.14
GPC3-202ENST00000394299 TULP2O00295 520 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 KRT1P04264 644 aa15.92■□□□□ 0.14
GPC3-202ENST00000394299 PAEPP09466 180 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms