RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 OTOP3Q7RTS5 596 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 FAM186BQ8IYM0 893 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 ZDHHC14Q8IZN3 488 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 ADSSL1Q8N142 457 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 THEM5Q8N1Q8 247 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 TOP6BLQ8N6T0 577 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 GPR152Q8TDT2 470 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 ACSF2Q96CM8 615 aaPredicted RBP8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 MMS19Q96T76 1030 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 PI4K2AQ9BTU6 479 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 XYLT2Q9H1B5 865 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 DNAJC25Q9H1X3 360 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 DPEP3Q9H4B8 488 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 SMYD3Q9H7B4 428 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 GDAP2Q9NXN4 497 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 RAPGEFL1Q9UHV5 662 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 HOOK1Q9UJC3 728 aaKnown RBP8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 DSEQ9UL01 958 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 CTNND2Q9UQB3 1225 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 USTQ9Y2C2 406 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 FRMD4BQ9Y2L6 1034 aa8.23□□□□□ -1.09
HMGB3P1-201ENST00000393368 SCN1AP35498 2009 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 MYBPHLA2RUH7 354 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 PPP1R3GB7ZBB8 358 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 POU2F2P09086 479 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 PDGFRBP09619 1106 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 PYGBP11216 843 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 MYL4P12829 197 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 ALADP13716 330 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 ATF6P18850 670 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 PAX3P23760 479 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 RPL13P26373 211 aaKnown RBP8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 TIE1P35590 1138 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 PSMC2P35998 433 aaKnown RBP8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 PIK3CAP42336 1068 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 CDH8P55286 799 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 STX17P56962 302 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 TNNC1P63316 161 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 CLDN10P78369 228 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 ZXDAP98168 799 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 MYL7Q01449 175 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 TSPY1Q01534 308 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 ORC1Q13415 861 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 MORC3Q14149 939 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 NFIL3Q16649 462 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 ZNF699Q32M78 642 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 EDRF1Q3B7T1 1238 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 WDR72Q3MJ13 1102 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 INTS6LQ5JSJ4 861 aaKnown RBP8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 PRSS36Q5K4E3 855 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 PARM1Q6UWI2 310 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 CYP26C1Q6V0L0 522 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 SV2AQ7L0J3 742 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 GPIHBP1Q8IV16 184 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 NPAS3Q8IXF0 933 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 TMEM86AQ8N2M4 240 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 FAM200AQ8TCP9 573 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 TAS1R2Q8TE23 839 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 GIPC2Q8TF65 315 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 TMEM174Q8WUU8 243 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 FGF13Q92913 245 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 MYLPFQ96A32 169 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 MCRS1Q96EZ8 462 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 IPO9Q96P70 1041 aaKnown RBP8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 PKMYT1Q99640 499 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 TSG101Q99816 390 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 RPP25Q9BUL9 199 aaKnown RBP8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 OXCT2Q9BYC2 517 aaPredicted RBP8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 SDCBP2Q9H190 292 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 KCNK12Q9HB15 430 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 ZNF334Q9HCZ1 680 aaPredicted RBP8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 CRTAC1Q9NQ79 661 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 LMBRD1Q9NUN5 540 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 GTF3C4Q9UKN8 822 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 MRPS23Q9Y3D9 190 aaKnown RBP8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 NUMBLQ9Y6R0 609 aa8.22□□□□□ -1.09
HMGB3P1-201ENST00000393368 GABRDO14764 452 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 CETN3O15182 167 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 MOSPD3O75425 235 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 PDGFBP01127 241 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 HLA-DRAP01903 254 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 EPB41P11171 864 aaKnown RBP8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 LAMP2P13473 410 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 KRT13P13646 458 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 PTPN2P17706 415 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 WARSP23381 471 aaKnown RBP8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 CYP2F1P24903 491 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 ALDH1A3P47895 512 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 PLD1Q13393 1074 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 MTMR3Q13615 1198 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 HTR4Q13639 388 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 TEAD2Q15562 447 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 ZACNQ401N2 412 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 COBLL1Q53SF7 1204 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 DCAF17Q5H9S7 520 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 MDH1BQ5I0G3 518 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 STXBP5Q5T5C0 1151 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 IQCEQ6IPM2 695 aa8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 INTS8Q75QN2 995 aaKnown RBP8.21□□□□□ -1.1
HMGB3P1-201ENST00000393368 PDZD4Q76G19 769 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms