RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 CYTH4Q9UIA0 394 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 UBQLN1Q9UMX0 589 aaKnown RBP21.48■■□□□ 1.03
ME3-202ENST00000393324 SNX9Q9Y5X1 595 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 CDY2AQ9Y6F7 541 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 TMEM191CA6NGB0 347 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 TTI1O43156 1089 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 VDRP11473 427 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 ELNP15502 786 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 CCND3P30281 292 aaPredicted RBP21.47■■□□□ 1.03
ME3-202ENST00000393324 SLC20A2Q08357 652 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 PAK2Q13177 524 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 PTPN20Q4JDL3 420 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 VIPAS39Q9H9C1 493 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 IP6K2Q9UHH9 426 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 IPPQ9Y573 584 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 SMIM28A0A1B0GU29 152 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 TWF2Q6IBS0 349 aaKnown RBP21.47■■□□□ 1.03
ME3-202ENST00000393324 DCUN1D2Q6PH85 259 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 ZDHHC14Q8IZN3 488 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 LRRC52Q8N7C0 313 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 CAPNS2Q96L46 248 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 MCEEQ96PE7 176 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 STRIP2Q9ULQ0 834 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.47■■□□□ 1.03
ME3-202ENST00000393324 USTQ9Y2C2 406 aa21.47■■□□□ 1.03
ME3-202ENST00000393324 MICAL2O94851 1124 aa21.46■■□□□ 1.03
ME3-202ENST00000393324 PRKAR2AP13861 404 aaKnown RBP21.46■■□□□ 1.03
ME3-202ENST00000393324 CNGA2Q16280 664 aa21.46■■□□□ 1.03
ME3-202ENST00000393324 DEFB115Q30KQ5 88 aa21.46■■□□□ 1.03
ME3-202ENST00000393324 SGO2Q562F6 1265 aa21.46■■□□□ 1.03
ME3-202ENST00000393324 C9orf57Q5W0N0 161 aa21.46■■□□□ 1.03
ME3-202ENST00000393324 DPH6Q7L8W6 267 aa21.46■■□□□ 1.03
ME3-202ENST00000393324 RSPH3Q86UC2 560 aa21.46■■□□□ 1.03
ME3-202ENST00000393324 PRELID2Q8N945 189 aa21.46■■□□□ 1.03
ME3-202ENST00000393324 C3orf20Q8ND61 904 aa21.46■■□□□ 1.03
ME3-202ENST00000393324 ZBTB9Q96C00 473 aa21.46■■□□□ 1.03
ME3-202ENST00000393324 DDX27Q96GQ7 796 aaKnown RBP21.46■■□□□ 1.03
ME3-202ENST00000393324 NT5C1AQ9BXI3 368 aa21.46■■□□□ 1.03
ME3-202ENST00000393324 TRPV2Q9Y5S1 764 aa21.46■■□□□ 1.03
ME3-202ENST00000393324 TCRBV7S2A1N4TA0A589 114 aa21.45■■□□□ 1.03
ME3-202ENST00000393324 ASGR1P07306 291 aa21.45■■□□□ 1.03
ME3-202ENST00000393324 MAN1A1P33908 653 aa21.45■■□□□ 1.03
ME3-202ENST00000393324 GPS2Q13227 327 aa21.45■■□□□ 1.03
ME3-202ENST00000393324 PPP1R15BQ5SWA1 713 aa21.45■■□□□ 1.03
ME3-202ENST00000393324 RHOT1Q8IXI2 618 aa21.45■■□□□ 1.03
ME3-202ENST00000393324 SMG8Q8ND04 991 aaKnown RBP21.45■■□□□ 1.03
ME3-202ENST00000393324 WNT8BQ93098 351 aa21.45■■□□□ 1.03
ME3-202ENST00000393324 ACBD3Q9H3P7 528 aa21.45■■□□□ 1.03
ME3-202ENST00000393324 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.45■■□□□ 1.03
ME3-202ENST00000393324 HPCAL4Q9UM19 191 aa21.45■■□□□ 1.03
ME3-202ENST00000393324 ERICH4A6NGS2 130 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 M0QYV0 167 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 O00370 1275 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 PSTPIP1O43586 416 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 PHF2O75151 1096 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 TOMM70O94826 608 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 CD4P01730 458 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 HMGCRP04035 888 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 TAS2R40P59535 323 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 TAP1Q03518 808 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 LLGL1Q15334 1064 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 KCNA10Q16322 511 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 KCTD19Q17RG1 926 aaPredicted RBP21.45■■□□□ 1.02
ME3-202ENST00000393324 XKR4Q5GH76 650 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 CAVIN3Q969G5 261 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 CPXM1Q96SM3 734 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 MRPL45Q9BRJ2 306 aaKnown RBP21.45■■□□□ 1.02
ME3-202ENST00000393324 TJP2Q9UDY2 1190 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 MTUS1Q9ULD2 1270 aa21.45■■□□□ 1.02
ME3-202ENST00000393324 HTTP42858 3142 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 BHMG1C9JSJ3 638 aaPredicted RBP21.44■■□□□ 1.02
ME3-202ENST00000393324 CTSHP09668 335 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 KCNE1P15382 129 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 SSR1P43307 286 aaKnown RBP21.44■■□□□ 1.02
ME3-202ENST00000393324 DR1Q01658 176 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 SERINC5Q86VE9 423 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 MAGOHBQ96A72 148 aaKnown RBP21.44■■□□□ 1.02
ME3-202ENST00000393324 C18orf8Q96DM3 657 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 SYNCQ9H7C4 482 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 KIAA1257Q9ULG3 409 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 XPOTO43592 962 aaKnown RBP21.44■■□□□ 1.02
ME3-202ENST00000393324 RPS6KA5O75582 802 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 ATF7P17544 494 aaPredicted RBP21.44■■□□□ 1.02
ME3-202ENST00000393324 CHRNA3P32297 505 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 ZNF252P-AS1Q0IIN9 211 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 CUL1Q13616 776 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 ARRDC4Q8NCT1 418 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 TSPAN18Q96SJ8 248 aa21.44■■□□□ 1.02
ME3-202ENST00000393324 UTP11Q9Y3A2 253 aaKnown RBP21.44■■□□□ 1.02
ME3-202ENST00000393324 GOLGA8SH3BPF8 625 aa21.43■■□□□ 1.02
ME3-202ENST00000393324 FAM153BP0C7A2 387 aa21.43■■□□□ 1.02
ME3-202ENST00000393324 RARAP10276 462 aa21.43■■□□□ 1.02
ME3-202ENST00000393324 OAS2P29728 719 aaKnown RBP21.43■■□□□ 1.02
ME3-202ENST00000393324 GPD2P43304 727 aa21.43■■□□□ 1.02
ME3-202ENST00000393324 PSMC1P62191 440 aaKnown RBP21.43■■□□□ 1.02
ME3-202ENST00000393324 OGDHQ02218 1023 aa21.43■■□□□ 1.02
ME3-202ENST00000393324 NFX1Q12986 1120 aaKnown RBP21.43■■□□□ 1.02
ME3-202ENST00000393324 FAM153CQ494X1 144 aa21.43■■□□□ 1.02
ME3-202ENST00000393324 SESTD1Q86VW0 696 aa21.43■■□□□ 1.02
ME3-202ENST00000393324 DDX42Q86XP3 938 aaKnown RBP eCLIP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms