RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.88■□□□□ 0.136e-8■■■■■ 30.2
MKS1-202ENST00000393119 PAAF1Q9BRP4 392 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 TMEM59LQ9UK28 342 aa15.88■□□□□ 0.13
MKS1-202ENST00000393119 H3BQF6 201 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 HMGCRP04035 888 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 MLH1P40692 756 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 ACLYP53396 1101 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 MGAT3Q09327 533 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 TCEAL1Q15170 157 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 SOWAHAQ2M3V2 549 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 RASGEF1CQ8N431 466 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 ACTRT1Q8TDG2 376 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 PIWIL1Q96J94 861 aaKnown RBP15.87■□□□□ 0.13
MKS1-202ENST00000393119 MCEEQ96PE7 176 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 GAD1Q99259 594 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 UVRAGQ9P2Y5 699 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 AMACRQ9UHK6 382 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 CITO14578 2027 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 PGRMC1O00264 195 aaKnown RBP15.87■□□□□ 0.13
MKS1-202ENST00000393119 TLR3O15455 904 aaKnown RBP15.87■□□□□ 0.13
MKS1-202ENST00000393119 TXNRD3NBQ6F5E7 133 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 C8orf74Q6P047 294 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 SRLQ86TD4 932 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 DDX42Q86XP3 938 aaKnown RBP eCLIP15.87■□□□□ 0.13
MKS1-202ENST00000393119 EMC1Q8N766 993 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 PLEKHA5Q9HAU0 1116 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 ARFGAP3Q9NP61 516 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 ADAM21Q9UKJ8 722 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 PADI3Q9ULW8 664 aa15.87■□□□□ 0.13
MKS1-202ENST00000393119 CCDC151A5D8V7 595 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 F8VP50 259 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 M0QYV0 167 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 KPNA6O60684 536 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 ERBB2P04626 1255 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 ATICP31939 592 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 SSR1P43307 286 aaKnown RBP15.86■□□□□ 0.13
MKS1-202ENST00000393119 RGS7P49802 495 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 RAB6CQ53S08 254 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 PPP1R26Q5T8A7 1209 aaPredicted RBP15.86■□□□□ 0.13
MKS1-202ENST00000393119 LHX8Q68G74 356 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 PLEKHA7Q6IQ23 1121 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 JOSD2Q8TAC2 188 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 RPGRIP1Q96KN7 1286 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 FAM118BQ9BPY3 351 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 SELENOOQ9BVL4 669 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 RAB6CQ9H0N0 254 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 VRTNQ9H8Y1 702 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 M0QZ92 97 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 MYO1FO00160 1098 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 CARSP49589 748 aaKnown RBP15.86■□□□□ 0.13
MKS1-202ENST00000393119 RABGGTBP53611 331 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 GUCY2DQ02846 1103 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 KYAT1Q16773 422 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 ERICH1Q86X53 443 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 TMEM35BQ8NCS4 154 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 BEST2Q8NFU1 509 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 OR6B3Q8NGW1 331 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 HNRNPLLQ8WVV9 542 aaKnown RBP15.86■□□□□ 0.13
MKS1-202ENST00000393119 FAM105AQ9NUU6 356 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 BARX2Q9UMQ3 279 aaPredicted RBP15.86■□□□□ 0.13
MKS1-202ENST00000393119 PTCH2Q9Y6C5 1203 aa15.86■□□□□ 0.13
MKS1-202ENST00000393119 TCRBV5S1A1TA0A578 114 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 SART1O43290 800 aaKnown RBP15.85■□□□□ 0.13
MKS1-202ENST00000393119 AXLP30530 894 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 PAN2Q504Q3 1202 aaKnown RBP15.85■□□□□ 0.13
MKS1-202ENST00000393119 IFT81Q8WYA0 676 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 EPB41L5Q9HCM4 733 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 AVENQ9NQS1 362 aaPredicted RBP15.85■□□□□ 0.13
MKS1-202ENST00000393119 PCDHGC3Q9UN70 934 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 TIMM13Q9Y5L4 95 aaPredicted RBP15.85■□□□□ 0.13
MKS1-202ENST00000393119 PIRO00625 290 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 TRIM66O15016 1216 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 ATP2C2O75185 946 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 GRAP2O75791 330 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 HEXIM1O94992 359 aaKnown RBP15.85■□□□□ 0.13
MKS1-202ENST00000393119 PFKMP08237 780 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 RFC1P35251 1148 aaPredicted RBP15.85■□□□□ 0.13
MKS1-202ENST00000393119 MYO1EQ12965 1108 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 LPIN1Q14693 890 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 WDR93Q6P2C0 686 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 CCNI2Q6ZMN8 369 aaPredicted RBP15.85■□□□□ 0.13
MKS1-202ENST00000393119 TRIM72Q6ZMU5 477 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 AGMOQ6ZNB7 445 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 FEZF2Q8TBJ5 459 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 KBTBD7Q8WVZ9 684 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 HEMGNQ9BXL5 484 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 TSPAN16Q9UKR8 245 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.85■□□□□ 0.13
MKS1-202ENST00000393119 NOD1Q9Y239 953 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 PCDHA3Q9Y5H8 950 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 LAMA3Q16787 3333 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 THSD7BQ9C0I4 1608 aa15.85■□□□□ 0.13
MKS1-202ENST00000393119 F8W810 466 aa15.84■□□□□ 0.13
MKS1-202ENST00000393119 I3L4J1 428 aa15.84■□□□□ 0.13
MKS1-202ENST00000393119 ACAT1P24752 427 aaKnown RBP15.84■□□□□ 0.13
MKS1-202ENST00000393119 CTNNA1P35221 906 aaKnown RBP15.84■□□□□ 0.13
MKS1-202ENST00000393119 ACTN2P35609 894 aa15.84■□□□□ 0.13
MKS1-202ENST00000393119 GPD2P43304 727 aa15.84■□□□□ 0.13
MKS1-202ENST00000393119 SCNN1GP51170 649 aa15.84■□□□□ 0.13
MKS1-202ENST00000393119 NKX3-2P78367 333 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms